ENSDARG00000099374


Danio rerio

Features
Gene ID: ENSDARG00000099374
  
Biological name :sp9
  
Synonyms : Q6NW96 / sp9 / sp9 transcription factor
  
Possible biological names infered from orthology : P0CG40 / Q64HY3 / Transcription factor Sp9
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 2591968
Gene end: 2594464
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000141658
Ensembl peptide - ENSDARP00000145264
NCBI entrez gene - 405896     See in Manteia.
RefSeq - NM_212960
RefSeq Peptide - NP_998125
swissprot - Q6NW96
ZFIN ID - ZDB-GENE-040426-2313
Ensembl - ENSDARG00000099374
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SP9ENSGALG00000043079Gallus gallus
 SP9ENSG00000217236Homo sapiens
 Sp9ENSMUSG00000068859Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sp8b / Q6P0J3 / sp8 transcription factor bENSDARG0000005666661
sp8a / sp8 transcription factor a / SP8* / Q8IXZ3* / Q8BMJ8* / Sp8 transcription factor* / Transcription factor Sp8 *ENSDARG0000001187056
sp7 / Sp7 transcription factor / Q8TDD2* / Q8VI67* / Mus musculus Sp7 transcription factor 7 (Sp7), transcript variant 2, mRNA.*ENSDARG0000001951636
sp4 / sp4 transcription factor / Q02446*ENSDARG0000000518632
sp5a / Sp5 transcription factor a / SP5* / Q9JHX2* / Q6BEB4* / Sp5 transcription factor* / Transcription factor Sp5 *ENSDARG0000007657131
sp3a / sp3a transcription factor / SP3* / Q02447* / O70494* / Sp3 transcription factor* / Transcription factor Sp3 *ENSDARG0000000154929
sp1 / sp1 transcription factor / O89090* / P08047* / Transcription factor Sp1 *ENSDARG0000008834728
sp5l / Sp5 transcription factor-like / SP5* / Q6BEB4* / Sp5 transcription factor*ENSDARG0000011586828
FO704755.1ENSDARG0000000584627
sp3b / Sp3b transcription factor / SP3* / Q02447* / O70494* / Sp3 transcription factor* / Transcription factor Sp3 *ENSDARG0000000781226
sp2 / sp2 transcription factor / Q02086*ENSDARG0000007676325
sp6 / Sp6 transcription factor / Q3SY56* / Q9ESX2* / trans-acting transcription factor 6*ENSDARG0000009988025
klf11a / Kruppel-like factor 11a / KLF11* / Q8K1S5* / O14901* / Kruppel like factor 11* / Krueppel-like factor 11 *ENSDARG0000003084420
klf11b / Kruppel-like factor 11b / KLF11* / Q8K1S5* / O14901* / Kruppel like factor 11* / Krueppel-like factor 11 *ENSDARG0000001379420
klf13 / Kruppel-like factor 13 / Q9JJZ6* / Q9Y2Y9* / Krueppel-like factor 13 *ENSDARG0000006136817
zgc:153115ENSDARG0000006934217
klf9 / Kruppel-like factor 9 / Q13886*ENSDARG0000006819414


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0030326 embryonic limb morphogenesis IMP
 biological_processGO:0035118 embryonic pectoral fin morphogenesis IMP
 biological_processGO:0045743 positive regulation of fibroblast growth factor receptor signaling pathway IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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