ENSDARG00000076571


Danio rerio

Features
Gene ID: ENSDARG00000076571
  
Biological name :sp5a
  
Synonyms : sp5a / Sp5 transcription factor a
  
Possible biological names infered from orthology : Q6BEB4 / Q9JHX2 / SP5 / Sp5 transcription factor / Transcription factor Sp5
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 3666401
Gene end: 3671911
  
Corresponding Affymetrix probe sets: Dr.23472.1.S1_at (Zebrafish Array)   NM_180973_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000093674
NCBI entrez gene - 353154     See in Manteia.
RefSeq - NM_180973
RefSeq Peptide - NP_851304
swissprot - B0S6I8
ZFIN ID - ZDB-GENE-030430-2
Ensembl - ENSDARG00000076571
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SP5ENSGALG00000034094Gallus gallus
 SP5ENSG00000204335Homo sapiens
 Sp5ENSMUSG00000075304Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sp5l / Sp5 transcription factor-like / SP5* / Q6BEB4* / Sp5 transcription factor*ENSDARG0000011586850
sp8a / sp8 transcription factor a / SP8* / Q8IXZ3* / Q8BMJ8* / Sp8 transcription factor* / Transcription factor Sp8 *ENSDARG0000001187037
sp8b / Q6P0J3 / sp8 transcription factor bENSDARG0000005666637
sp9 / Q6NW96 / sp9 transcription factor / Q64HY3* / P0CG40* / Transcription factor Sp9 *ENSDARG0000009937436
FO704755.1ENSDARG0000000584636
sp4 / sp4 transcription factor / Q02446*ENSDARG0000000518634
sp3a / sp3a transcription factor / SP3* / Q02447* / O70494* / Sp3 transcription factor* / Transcription factor Sp3 *ENSDARG0000000154933
sp1 / sp1 transcription factor / O89090* / P08047* / Transcription factor Sp1 *ENSDARG0000008834731
sp7 / Sp7 transcription factor / Q8TDD2* / Q8VI67* / Mus musculus Sp7 transcription factor 7 (Sp7), transcript variant 2, mRNA.*ENSDARG0000001951630
sp3b / Sp3b transcription factor / SP3* / Q02447* / O70494* / Sp3 transcription factor* / Transcription factor Sp3 *ENSDARG0000000781230
sp2 / sp2 transcription factor / Q02086*ENSDARG0000007676329
klf11b / Kruppel-like factor 11b / KLF11* / Q8K1S5* / O14901* / Kruppel like factor 11* / Krueppel-like factor 11 *ENSDARG0000001379423
sp6 / Sp6 transcription factor / Q3SY56* / Q9ESX2* / trans-acting transcription factor 6*ENSDARG0000009988023
klf11a / Kruppel-like factor 11a / KLF11* / Q8K1S5* / O14901* / Kruppel like factor 11* / Krueppel-like factor 11 *ENSDARG0000003084421
zgc:153115ENSDARG0000006934219
klf13 / Kruppel-like factor 13 / Q9JJZ6* / Q9Y2Y9* / Krueppel-like factor 13 *ENSDARG0000006136818
klf9 / Kruppel-like factor 9 / Q13886*ENSDARG0000006819417


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0048332 mesoderm morphogenesis IGI
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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