ENSDARG00000099880


Danio rerio

Features
Gene ID: ENSDARG00000099880
  
Biological name :sp6
  
Synonyms : sp6 / Sp6 transcription factor
  
Possible biological names infered from orthology : Q3SY56 / Q9ESX2 / trans-acting transcription factor 6
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 59533317
Gene end: 59539898
  
Corresponding Affymetrix probe sets: Dr.23069.1.A1_at (Zebrafish Array)   Dr.23069.1.A1_x_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000138301
Ensembl peptide - ENSDARP00000135905
NCBI entrez gene - 402928     See in Manteia.
RefSeq - NM_205632
RefSeq - XM_021468395
RefSeq Peptide - NP_991195
swissprot - A0A0R4IPM5
ZFIN ID - ZDB-GENE-040426-1824
Ensembl - ENSDARG00000099880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SP6ENSG00000189120Homo sapiens
 Sp6ENSMUSG00000038560Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sp8b / Q6P0J3 / sp8 transcription factor bENSDARG0000005666640
sp9 / Q6NW96 / sp9 transcription factor / Q64HY3* / P0CG40* / Transcription factor Sp9 *ENSDARG0000009937439
sp8a / sp8 transcription factor a / SP8* / Q8IXZ3* / Q8BMJ8* / Sp8 transcription factor* / Transcription factor Sp8 *ENSDARG0000001187037
sp7 / Sp7 transcription factor / Q8TDD2* / Q8VI67* / Mus musculus Sp7 transcription factor 7 (Sp7), transcript variant 2, mRNA.*ENSDARG0000001951633
sp5a / Sp5 transcription factor a / SP5* / Q9JHX2* / Q6BEB4* / Sp5 transcription factor* / Transcription factor Sp5 *ENSDARG0000007657131
sp5l / Sp5 transcription factor-like / SP5* / Q6BEB4* / Sp5 transcription factor*ENSDARG0000011586830
sp1 / sp1 transcription factor / O89090* / P08047* / Transcription factor Sp1 *ENSDARG0000008834729
sp3b / Sp3b transcription factor / SP3* / Q02447* / O70494* / Sp3 transcription factor* / Transcription factor Sp3 *ENSDARG0000000781228
sp3a / sp3a transcription factor / SP3* / Q02447* / O70494* / Sp3 transcription factor* / Transcription factor Sp3 *ENSDARG0000000154928
sp4 / sp4 transcription factor / Q02446*ENSDARG0000000518628
sp2 / sp2 transcription factor / Q02086*ENSDARG0000007676326
FO704755.1ENSDARG0000000584626
klf11b / Kruppel-like factor 11b / KLF11* / Q8K1S5* / O14901* / Kruppel like factor 11* / Krueppel-like factor 11 *ENSDARG0000001379422
klf11a / Kruppel-like factor 11a / KLF11* / Q8K1S5* / O14901* / Kruppel like factor 11* / Krueppel-like factor 11 *ENSDARG0000003084422
klf13 / Kruppel-like factor 13 / Q9JJZ6* / Q9Y2Y9* / Krueppel-like factor 13 *ENSDARG0000006136819
zgc:153115ENSDARG0000006934219
klf9 / Kruppel-like factor 9 / Q13886*ENSDARG0000006819419


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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