ENSG00000189120


Homo sapiens

Features
Gene ID: ENSG00000189120
  
Biological name :SP6
  
Synonyms : Q3SY56 / SP6 / Sp6 transcription factor
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q21.32
Gene start: 47844908
Gene end: 47855874
  
Corresponding Affymetrix probe sets: 228975_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000340799
Ensembl peptide - ENSP00000438209
NCBI entrez gene - 80320     See in Manteia.
OMIM - 608613
RefSeq - XM_006722115
RefSeq - NM_001258248
RefSeq - NM_199262
RefSeq Peptide - NP_954871
RefSeq Peptide - NP_001245177
swissprot - Q3SY56
Ensembl - ENSG00000189120
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sp6ENSDARG00000099880Danio rerio
 Sp6ENSMUSG00000038560Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SP8 / Q8IXZ3 / Sp8 transcription factorENSG0000016465141
SP9 / P0CG40 / Sp9 transcription factorENSG0000021723638
SP5 / Q6BEB4 / Sp5 transcription factorENSG0000020433533
SP7 / Q8TDD2 / Sp7 transcription factorENSG0000017037433
SP1 / P08047 / Sp1 transcription factorENSG0000018559131
SP4 / Q02446 / Sp4 transcription factorENSG0000010586630
SP3 / Q02447 / Sp3 transcription factorENSG0000017284529
SP2 / Q02086 / Sp2 transcription factorENSG0000016718224
KLF11 / O14901 / Kruppel like factor 11ENSG0000017205922
KLF10 / Q13118 / Kruppel like factor 10ENSG0000015509019
KLF13 / Q9Y2Y9 / Kruppel like factor 13ENSG0000016992617
KLF14 / Kruppel like factor 14ENSG0000026626517
KLF16 / Q9BXK1 / Kruppel like factor 16ENSG0000012991116
KLF9 / Q13886 / Kruppel like factor 9ENSG0000011913815


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0042481 regulation of odontogenesis IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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