ENSG00000170374


Homo sapiens

Features
Gene ID: ENSG00000170374
  
Biological name :SP7
  
Synonyms : Q8TDD2 / SP7 / Sp7 transcription factor
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.13
Gene start: 53326575
Gene end: 53345315
  
Corresponding Affymetrix probe sets: 1552340_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000449355
Ensembl peptide - ENSP00000302812
Ensembl peptide - ENSP00000441367
Ensembl peptide - ENSP00000443827
NCBI entrez gene - 121340     See in Manteia.
OMIM - 606633
RefSeq - XM_011537900
RefSeq - NM_001173467
RefSeq - NM_001300837
RefSeq - NM_152860
RefSeq Peptide - NP_001166938
RefSeq Peptide - NP_001287766
RefSeq Peptide - NP_690599
swissprot - A0A024RAY8
swissprot - F8VV67
swissprot - Q8TDD2
Ensembl - ENSG00000170374
  
Related genetic diseases (OMIM): 613849 - ?Osteogenesis imperfecta, type XII, 613849

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sp7ENSDARG00000019516Danio rerio
 Sp7ENSMUSG00000060284Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SP9 / P0CG40 / Sp9 transcription factorENSG0000021723636
SP8 / Q8IXZ3 / Sp8 transcription factorENSG0000016465136
SP3 / Q02447 / Sp3 transcription factorENSG0000017284531
SP4 / Q02446 / Sp4 transcription factorENSG0000010586630
SP1 / P08047 / Sp1 transcription factorENSG0000018559129
SP6 / Q3SY56 / Sp6 transcription factorENSG0000018912029
SP5 / Q6BEB4 / Sp5 transcription factorENSG0000020433527
SP2 / Q02086 / Sp2 transcription factorENSG0000016718224
KLF11 / O14901 / Kruppel like factor 11ENSG0000017205921
KLF10 / Q13118 / Kruppel like factor 10ENSG0000015509019
KLF16 / Q9BXK1 / Kruppel like factor 16ENSG0000012991118
KLF13 / Q9Y2Y9 / Kruppel like factor 13ENSG0000016992618
KLF14 / Kruppel like factor 14ENSG0000026626518
KLF9 / Q13886 / Kruppel like factor 9ENSG0000011913816


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001649 osteoblast differentiation ISS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II ISS
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 biological_processGO:0060218 hematopoietic stem cell differentiation IDA
 biological_processGO:2000738 positive regulation of stem cell differentiation IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding ISS
 molecular_functionGO:0017151 DEAD/H-box RNA helicase binding ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
RUNX2 regulates osteoblast differentiation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000324 Facial asymmetry 
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 HP:0000336 Prominent supraorbital ridges "Abnormal prominence of the supraorbital ridges, which are bony ridge located above the eye sockets in the area of the eyebrows." [HPO:curators]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0000768 Pectus carinatum "A deformity of the chest caused by overgrowth of the ribs and characterized by protrusion of the sternum." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0002645 Wormian bones 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0040160 Generalized osteoporosis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000067955 CBFB / Q13951 / core-binding factor beta subunit  / reaction / complex
 ENSG00000124813 RUNX2 / Q13950 / runt related transcription factor 2  / reaction / complex






 

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