ENSDARG00000011870


Danio rerio

Features
Gene ID: ENSDARG00000011870
  
Biological name :sp8a
  
Synonyms : sp8a / sp8 transcription factor a
  
Possible biological names infered from orthology : Q8BMJ8 / Q8IXZ3 / SP8 / Sp8 transcription factor / Transcription factor Sp8
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 2315208
Gene end: 2318391
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000008476
Ensembl peptide - ENSDARP00000147031
NCBI entrez gene - 321264     See in Manteia.
RefSeq - NM_213241
RefSeq Peptide - NP_998406
swissprot - Q3L0W1
swissprot - Q6NWB4
ZFIN ID - ZDB-GENE-030131-9849
Ensembl - ENSDARG00000011870
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SP8ENSGALG00000035725Gallus gallus
 SP8ENSG00000164651Homo sapiens
 Sp8ENSMUSG00000048562Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sp8b / Q6P0J3 / sp8 transcription factor bENSDARG0000005666680
sp9 / Q6NW96 / sp9 transcription factor / Q64HY3* / P0CG40* / Transcription factor Sp9 *ENSDARG0000009937461
sp7 / Sp7 transcription factor / Q8TDD2* / Q8VI67* / Mus musculus Sp7 transcription factor 7 (Sp7), transcript variant 2, mRNA.*ENSDARG0000001951638
sp4 / sp4 transcription factor / Q02446*ENSDARG0000000518636
sp5a / Sp5 transcription factor a / SP5* / Q9JHX2* / Q6BEB4* / Sp5 transcription factor* / Transcription factor Sp5 *ENSDARG0000007657134
sp5l / Sp5 transcription factor-like / SP5* / Q6BEB4* / Sp5 transcription factor*ENSDARG0000011586830
sp3a / sp3a transcription factor / SP3* / Q02447* / O70494* / Sp3 transcription factor* / Transcription factor Sp3 *ENSDARG0000000154929
FO704755.1ENSDARG0000000584629
sp2 / sp2 transcription factor / Q02086*ENSDARG0000007676328
sp1 / sp1 transcription factor / O89090* / P08047* / Transcription factor Sp1 *ENSDARG0000008834728
sp3b / Sp3b transcription factor / SP3* / Q02447* / O70494* / Sp3 transcription factor* / Transcription factor Sp3 *ENSDARG0000000781227
sp6 / Sp6 transcription factor / Q3SY56* / Q9ESX2* / trans-acting transcription factor 6*ENSDARG0000009988026
klf11b / Kruppel-like factor 11b / KLF11* / Q8K1S5* / O14901* / Kruppel like factor 11* / Krueppel-like factor 11 *ENSDARG0000001379420
klf11a / Kruppel-like factor 11a / KLF11* / Q8K1S5* / O14901* / Kruppel like factor 11* / Krueppel-like factor 11 *ENSDARG0000003084419
zgc:153115ENSDARG0000006934217
klf13 / Kruppel-like factor 13 / Q9JJZ6* / Q9Y2Y9* / Krueppel-like factor 13 *ENSDARG0000006136817
klf9 / Kruppel-like factor 9 / Q13886*ENSDARG0000006819416


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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