ENSDARG00000101160


Danio rerio

Features
Gene ID: ENSDARG00000101160
  
Biological name :apoa4a
  
Synonyms : apoa4a / apolipoprotein A-IV a
  
Possible biological names infered from orthology : APOA4 / APOA5 / apolipoprotein A4 / apolipoprotein A5 / Apolipoprotein A-IV / Mus musculus apolipoprotein A-V (Apoa5), transcript variant 2, mRNA. / P06727 / P06728 / Q6Q788 / Q8C7G5
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 10845953
Gene end: 10850834
  
Corresponding Affymetrix probe sets: Dr.19663.1.A1_at (Zebrafish Array)   NM_001017909_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000132213
Ensembl peptide - ENSDARP00000149242
Ensembl peptide - ENSDARP00000138032
NCBI entrez gene - 550608     See in Manteia.
RefSeq - NM_001017909
RefSeq - XM_021468057
RefSeq Peptide - NP_001017909
swissprot - A0A0R4IU48
swissprot - A0A0R4IDS0
ZFIN ID - ZDB-GENE-050417-469
Ensembl - ENSDARG00000101160
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 APOA4ENSGALG00000007109Gallus gallus
 APOA5ENSGALG00000014368Gallus gallus
 APOA4ENSG00000110244Homo sapiens
 APOA5ENSG00000110243Homo sapiens
 Apoa4ENSMUSG00000032080Mus musculus
 Apoa5ENSMUSG00000032079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
apoa4b.1 / apolipoprotein A-IV b, tandem duplicate 1 / APOA4* / APOA5* / Q8C7G5* / P06727* / P06728* / Q6Q788* / apolipoprotein A5* / apolipoprotein A4* / Apolipoprotein A-IV * / Mus muscul...ENSDARG0000004029842
apoa4b.2 / apolipoprotein A-IV b, tandem duplicate 2 / APOA4* / APOA5* / Q8C7G5* / P06727* / P06728* / Q6Q788* / apolipoprotein A5* / apolipoprotein A4* / Apolipoprotein A-IV * / Mus muscul...ENSDARG0000002086640
apoa4b.3 / apoa4b.2 / apolipoprotein A-IV b, tandem duplicate 3 / APOA4* / APOA5* / Q8C7G5* / P06727* / P06728* / Q6Q788* / apolipoprotein A5* / apolipoprotein A4* / Apolipoprotein A-IV * /...ENSDARG0000009492939
apoa1a / O42363 / apolipoprotein A-Ia / APOA1* / Q00623* / P02647* / apolipoprotein A1* / Apolipoprotein A-I Proapolipoprotein A-I Truncated apolipoprotein A-I*ENSDARG0000001207616
apoa1b / apolipoprotein A-Ib / APOA1* / P02647* / apolipoprotein A1*ENSDARG0000010132416


Protein motifs (from Interpro)
Interpro ID Name
 IPR000074  Apolipoprotein A/E


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0042157 lipoprotein metabolic process IEA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation
Chylomicron assembly
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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