ENSDARG00000101225


Danio rerio

Features
Gene ID: ENSDARG00000101225
  
Biological name :cngb3.1
  
Synonyms : cngb3.1 / cyclic nucleotide gated channel beta 3, tandem duplicate 1
  
Possible biological names infered from orthology : CNGB3 / Cyclic nucleotide-gated cation channel beta-3 / cyclic nucleotide gated channel beta 3 / Q9JJZ9 / Q9NQW8
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 31402894
Gene end: 31425799
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134762
Ensembl peptide - ENSDARP00000140735
swissprot - A0A0R4IL01
swissprot - A0A0R4IY63
ZFIN ID - ZDB-GENE-090611-1
Ensembl - ENSDARG00000101225
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNGB3ENSGALG00000037644Gallus gallus
 CNGB3ENSG00000170289Homo sapiens
 Cngb3ENSMUSG00000056494Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cngb3.2 / cyclic nucleotide gated channel beta 3, tandem duplicate 2 / CNGB3* / Q9JJZ9* / Q9NQW8* / cyclic nucleotide gated channel beta 3* / Cyclic nucleotide-gated cation channel beta-3 *ENSDARG0000010136858
cngb1a / cyclic nucleotide gated channel beta 1a / CNGB1* / Q14028* / cyclic nucleotide gated channel beta 1*ENSDARG0000006824241
si:dkey-44k1.5 / CNGB1* / Q14028* / cyclic nucleotide gated channel beta 1*ENSDARG0000004210741
cnga5 / cyclic nucleotide gated channel alpha 5 / CNGA2* / Q62398* / Q16280* / cyclic nucleotide gated channel alpha 2* / Cyclic nucleotide-gated olfactory channel *ENSDARG0000010296822
cnga1 / cyclic nucleotide gated channel alpha 1 / P29973* / P29974* / cGMP-gated cation channel alpha-1 *ENSDARG0000001212522
cnga3a / cyclic nucleotide gated channel alpha 3a / CNGA3* / Q16281* / Q9JJZ8* / cyclic nucleotide gated channel alpha 3* / Cyclic nucleotide-gated cation channel alpha-3 *ENSDARG0000007072622
cnga4 / cyclic nucleotide gated channel alpha 4 / Q3UW12* / Q8IV77* / Cyclic nucleotide-gated cation channel alpha-4 *ENSDARG0000006938322
si:dkey-22i16.2 / CNGA1* / P29973* / P29974* / cGMP-gated cation channel alpha-1 * / cyclic nucleotide gated channel alpha 1*ENSDARG0000002989821
cnga2 / cyclic nucleotide gated channel alpha 2 / Q16280*ENSDARG0000010043621
cnga3b / cyclic nucleotide gated channel alpha 3b / CNGA3* / Q16281* / Q9JJZ8* / cyclic nucleotide gated channel alpha 3* / Cyclic nucleotide-gated cation channel alpha-3 *ENSDARG0000001229721
hcn4 / hyperpolarization activated cyclic nucleotide-gated potassium channel 4 / Q9Y3Q4*ENSDARG0000006168515
hcn2b / hyperpolarization activated cyclic nucleotide-gated potassium channel 2bENSDARG0000006166514
hcn3 / hyperpolarization activated cyclic nucleotide-gated potassium channel 3 / O88705* / Q9P1Z3* / Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 *ENSDARG0000002719214
hcn4l / hyperpolarization activated cyclic nucleotide-gated potassium channel 4l / HCN4* / Q9Y3Q4* / hyperpolarization activated cyclic nucleotide gated potassium channel 4*ENSDARG0000007441913
hcn1 / hyperpolarization activated cyclic nucleotide-gated potassium channel 1 / O60741* / O88704* / Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 *ENSDARG0000010448013
si:rp71-68n21.12ENSDARG0000007738211
CABZ01086574.1 / HCN4* / Q9Y3Q4* / hyperpolarization activated cyclic nucleotide gated potassium channel 4*ENSDARG000001164046


Protein motifs (from Interpro)
Interpro ID Name
 IPR000595  Cyclic nucleotide-binding domain
 IPR014710  RmlC-like jelly roll fold
 IPR018488  Cyclic nucleotide-binding, conserved site
 IPR018490  Cyclic nucleotide-binding-like
 IPR032943  Cyclic nucleotide-gated cation channel beta-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0098655 cation transmembrane transport IEA
 molecular_functionGO:0005221 intracellular cyclic nucleotide activated cation channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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