ENSDARG00000102968


Danio rerio

Features
Gene ID: ENSDARG00000102968
  
Biological name :cnga5
  
Synonyms : cnga5 / cyclic nucleotide gated channel alpha 5
  
Possible biological names infered from orthology : CNGA2 / cyclic nucleotide gated channel alpha 2 / Cyclic nucleotide-gated olfactory channel / Q16280 / Q62398
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 13752432
Gene end: 13843665
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136862
NCBI entrez gene - 751786     See in Manteia.
RefSeq - NM_001044746
RefSeq Peptide - NP_001038211
swissprot - Q0GFG2
ZFIN ID - ZDB-GENE-061005-1
Ensembl - ENSDARG00000102968
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNGA2ENSGALG00000007282Gallus gallus
 CNGA2ENSG00000183862Homo sapiens
 Cnga2ENSMUSG00000005864Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cnga2 / cyclic nucleotide gated channel alpha 2 / Q16280*ENSDARG0000010043666
cnga3a / cyclic nucleotide gated channel alpha 3a / CNGA3* / Q16281* / Q9JJZ8* / cyclic nucleotide gated channel alpha 3* / Cyclic nucleotide-gated cation channel alpha-3 *ENSDARG0000007072661
cnga3b / cyclic nucleotide gated channel alpha 3b / CNGA3* / Q16281* / Q9JJZ8* / cyclic nucleotide gated channel alpha 3* / Cyclic nucleotide-gated cation channel alpha-3 *ENSDARG0000001229754
cnga1 / cyclic nucleotide gated channel alpha 1 / P29973* / P29974* / cGMP-gated cation channel alpha-1 *ENSDARG0000001212552
si:dkey-22i16.2 / CNGA1* / P29973* / P29974* / cGMP-gated cation channel alpha-1 * / cyclic nucleotide gated channel alpha 1*ENSDARG0000002989850
cnga4 / cyclic nucleotide gated channel alpha 4 / Q3UW12* / Q8IV77* / Cyclic nucleotide-gated cation channel alpha-4 *ENSDARG0000006938341
si:dkey-44k1.5 / CNGB1* / Q14028* / cyclic nucleotide gated channel beta 1*ENSDARG0000004210728
cngb1a / cyclic nucleotide gated channel beta 1a / CNGB1* / Q14028* / cyclic nucleotide gated channel beta 1*ENSDARG0000006824227
cngb3.2 / cyclic nucleotide gated channel beta 3, tandem duplicate 2 / CNGB3* / Q9JJZ9* / Q9NQW8* / cyclic nucleotide gated channel beta 3* / Cyclic nucleotide-gated cation channel beta-3 *ENSDARG0000010136825
cngb3.1 / cyclic nucleotide gated channel beta 3, tandem duplicate 1 / CNGB3* / Q9JJZ9* / Q9NQW8* / cyclic nucleotide gated channel beta 3* / Cyclic nucleotide-gated cation channel beta-3 *ENSDARG0000010122525
hcn4 / hyperpolarization activated cyclic nucleotide-gated potassium channel 4 / Q9Y3Q4*ENSDARG0000006168522
hcn1 / hyperpolarization activated cyclic nucleotide-gated potassium channel 1 / O60741* / O88704* / Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 *ENSDARG0000010448021
hcn2b / hyperpolarization activated cyclic nucleotide-gated potassium channel 2bENSDARG0000006166520
hcn4l / hyperpolarization activated cyclic nucleotide-gated potassium channel 4l / HCN4* / Q9Y3Q4* / hyperpolarization activated cyclic nucleotide gated potassium channel 4*ENSDARG0000007441920
hcn3 / hyperpolarization activated cyclic nucleotide-gated potassium channel 3 / O88705* / Q9P1Z3* / Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 *ENSDARG0000002719218
si:rp71-68n21.12ENSDARG0000007738216
CABZ01086574.1 / HCN4* / Q9Y3Q4* / hyperpolarization activated cyclic nucleotide gated potassium channel 4*ENSDARG000001164046


Protein motifs (from Interpro)
Interpro ID Name
 IPR000595  Cyclic nucleotide-binding domain
 IPR005821  Ion transport domain
 IPR014710  RmlC-like jelly roll fold
 IPR018488  Cyclic nucleotide-binding, conserved site
 IPR018490  Cyclic nucleotide-binding-like
 IPR032406  Cyclic nucleotide-gated channel, C-terminal leucine zipper domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IDA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0042391 regulation of membrane potential IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IDA
 molecular_functionGO:0005216 ion channel activity IDA
 molecular_functionGO:0005249 voltage-gated potassium channel activity IBA


Pathways (from Reactome)
Pathway description
VxPx cargo-targeting to cilium


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000047 peripheral olfactory organ peripheral olfactory organ cilium morphology , abnormal
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 ZFA:0000114 heart heart edematous , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curved , abnormal
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 ZFA:0001617 otolith otolith malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000100436 cnga2 / cyclic nucleotide gated channel alpha 2 / Q16280*  / complex
 ENSDARG00000102968 cnga5 / cyclic nucleotide gated channel alpha 5 / CNGA2* / Q62398* / Q16280* / cyclic nucleotide gated channel alpha 2* / Cyclic nucleotide-gated olfactory channel *  / complex
 ENSDARG00000067920 rab8a / RAB8A, member RAS oncogene family / P55258* / P61006*  / complex






 

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