ENSDARG00000104587


Danio rerio

Features
Gene ID: ENSDARG00000104587
  
Biological name :srl
  
Synonyms : sarcalumenin / srl
  
Possible biological names infered from orthology : Q7TQ48 / Q86TD4
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 12128117
Gene end: 12187245
  
Corresponding Affymetrix probe sets: Dr.21216.1.A1_at (Zebrafish Array)   Dr.5636.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000138572
Ensembl peptide - ENSDARP00000153671
NCBI entrez gene - 449670     See in Manteia.
swissprot - A0A0R4IRI3
swissprot - A0AUR2
ZFIN ID - ZDB-GENE-061110-91
Ensembl - ENSDARG00000104587
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SRLENSGALG00000038884Gallus gallus
 SRLENSG00000185739Homo sapiens
 SrlENSMUSG00000022519Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CABZ01072309.1 / SRL* / Q86TD4* / sarcalumenin*ENSDARG0000011295963
ehd2b / EH-domain containing 2b / EHD2* / Q9NZN4* / Q8BH64* / EH domain containing 2* / EH domain-containing protein 2 *ENSDARG0000004036227
ehd3 / EH-domain containing 3 / Q9NZN3*ENSDARG0000000786927
ehd1b / EH-domain containing 1b / EHD1* / Q9WVK4* / Q9H4M9* / EH domain containing 1* / EH domain-containing protein 1 *ENSDARG0000001479326
ehd2a / EH-domain containing 2a / EHD2* / Q9NZN4* / Q8BH64* / EH domain containing 2* / EH domain-containing protein 2 *ENSDARG0000003513726
ehd1a / EH-domain containing 1a / EHD1* / Q9WVK4* / Q9H4M9* / EH domain containing 1* / EH domain-containing protein 1 *ENSDARG0000009885326
ehd4 / EH-domain containing 4 / Q9EQP2* / Q9H223* / EH domain-containing protein 4 *ENSDARG0000005430226
eps15 / epidermal growth factor receptor pathway substrate 15 / P42566* / P42567* / Epidermal growth factor receptor substrate 15 *ENSDARG0000007821612
itsn2b / intersectin 2b / ITSN2* / Q9NZM3* / intersectin 2*ENSDARG0000005497311
eps15l1a / epidermal growth factor receptor pathway substrate 15-like 1a / Q9UBC2* / Q60902* / EPS15L1* / Epidermal growth factor receptor substrate 15-like 1 * / epidermal growth factor re...ENSDARG0000004267011
itsn2a / intersectin 2a / ITSN2* / Q9NZM3* / intersectin 2*ENSDARG0000000016110
reps1 / RALBP1 associated Eps domain containing 1 / O54916* / Q96D71* / RalBP1-associated Eps domain-containing protein 1 *ENSDARG000000028779
itsn1 / intersectin 1 (SH3 domain protein) / Q15811* / Q9Z0R4* / intersectin 1*ENSDARG000000000869
CABZ01066725.1 / Q9UBC2* / EPS15L1* / epidermal growth factor receptor pathway substrate 15 like 1*ENSDARG000001007009
reps2 / RALBP1 associated Eps domain containing 2 / Q8NFH8*ENSDARG000000767684
LO017845.1 / REPS2* / Q8NFH8* / RALBP1 associated Eps domain containing 2*ENSDARG000001150131


Protein motifs (from Interpro)
Interpro ID Name
 IPR022812  Dynamin superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030381  Dynamin-type guanine nucleotide-binding (G) domain
 IPR031692  EH domain-containing protein, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr