ENSDARG00000054973


Danio rerio

Features
Gene ID: ENSDARG00000054973
  
Biological name :itsn2b
  
Synonyms : intersectin 2b / itsn2b
  
Possible biological names infered from orthology : intersectin 2 / ITSN2 / Q9NZM3
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 30473507
Gene end: 30521043
  
Corresponding Affymetrix probe sets: Dr.26309.1.A1_at (Zebrafish Array)   Dr.6013.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000081545
NCBI entrez gene - 445153     See in Manteia.
RefSeq - NM_001003547
RefSeq Peptide - NP_001003547
swissprot - F1R0Z9
ZFIN ID - ZDB-GENE-050309-102
Ensembl - ENSDARG00000054973
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ITSN2ENSGALG00000016504Gallus gallus
 ITSN2ENSG00000198399Homo sapiens
 Itsn2ENSMUSG00000020640Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
itsn2a / intersectin 2a / ITSN2* / Q9NZM3* / intersectin 2*ENSDARG0000000016156
itsn1 / intersectin 1 (SH3 domain protein) / Q15811* / Q9Z0R4* / intersectin 1*ENSDARG0000000008647
eps15l1a / epidermal growth factor receptor pathway substrate 15-like 1a / Q9UBC2* / Q60902* / EPS15L1* / Epidermal growth factor receptor substrate 15-like 1 * / epidermal growth factor re...ENSDARG0000004267011
eps15 / epidermal growth factor receptor pathway substrate 15 / P42566* / P42567* / Epidermal growth factor receptor substrate 15 *ENSDARG0000007821610
CABZ01066725.1 / Q9UBC2* / EPS15L1* / epidermal growth factor receptor pathway substrate 15 like 1*ENSDARG000001007007
reps1 / RALBP1 associated Eps domain containing 1 / O54916* / Q96D71* / RalBP1-associated Eps domain-containing protein 1 *ENSDARG000000028776
ehd1b / EH-domain containing 1b / EHD1* / Q9WVK4* / Q9H4M9* / EH domain containing 1* / EH domain-containing protein 1 *ENSDARG000000147935
ehd4 / EH-domain containing 4 / Q9EQP2* / Q9H223* / EH domain-containing protein 4 *ENSDARG000000543025
ehd3 / EH-domain containing 3 / Q9NZN3*ENSDARG000000078695
ehd2b / EH-domain containing 2b / EHD2* / Q9NZN4* / Q8BH64* / EH domain containing 2* / EH domain-containing protein 2 *ENSDARG000000403625
ehd1a / EH-domain containing 1a / EHD1* / Q9WVK4* / Q9H4M9* / EH domain containing 1* / EH domain-containing protein 1 *ENSDARG000000988535
reps2 / RALBP1 associated Eps domain containing 2 / Q8NFH8*ENSDARG000000767684
ehd2a / EH-domain containing 2a / EHD2* / Q9NZN4* / Q8BH64* / EH domain containing 2* / EH domain-containing protein 2 *ENSDARG000000351374
srl / sarcalumenin / Q86TD4*ENSDARG000001045873
CABZ01072309.1 / SRL* / Q86TD4* / sarcalumenin*ENSDARG000001129592
LO017845.1 / REPS2* / Q8NFH8* / RALBP1 associated Eps domain containing 2*ENSDARG000001150130


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR000219  Dbl homology (DH) domain
 IPR000261  EH domain
 IPR001452  SH3 domain
 IPR001849  Pleckstrin homology domain
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR011993  PH-like domain superfamily
 IPR018247  EF-Hand 1, calcium-binding site
 IPR027029  Intersectin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0065009 regulation of molecular function IEA
 molecular_functionGO:0005089 Rho guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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