ENSG00000021574


Homo sapiens

Features
Gene ID: ENSG00000021574
  
Biological name :SPAST
  
Synonyms : Q9UBP0 / SPAST / spastin
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: p22.3
Gene start: 32063547
Gene end: 32157637
  
Corresponding Affymetrix probe sets: 207724_s_at (Human Genome U133 Plus 2.0 Array)   209748_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000496211
Ensembl peptide - ENSP00000496306
Ensembl peptide - ENSP00000496589
Ensembl peptide - ENSP00000496334
Ensembl peptide - ENSP00000320885
Ensembl peptide - ENSP00000340817
Ensembl peptide - ENSP00000480893
Ensembl peptide - ENSP00000482496
Ensembl peptide - ENSP00000493742
Ensembl peptide - ENSP00000493748
Ensembl peptide - ENSP00000493827
Ensembl peptide - ENSP00000494170
Ensembl peptide - ENSP00000494312
Ensembl peptide - ENSP00000494601
Ensembl peptide - ENSP00000494832
Ensembl peptide - ENSP00000495015
Ensembl peptide - ENSP00000495478
Ensembl peptide - ENSP00000496072
NCBI entrez gene - 6683     See in Manteia.
OMIM - 604277
RefSeq - XM_011533067
RefSeq - XM_005264516
RefSeq - NM_014946
RefSeq - NM_199436
RefSeq - XM_017004778
RefSeq - XM_017004777
RefSeq Peptide - NP_955468
RefSeq Peptide - NP_055761
swissprot - Q9UBP0
swissprot - E5KRP6
swissprot - E5KRP5
Ensembl - ENSG00000021574
  
Related genetic diseases (OMIM): 182601 - Spastic paraplegia 4, autosomal dominant, 182601
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spastENSDARG00000024933Danio rerio
 SPASTENSGALG00000010620Gallus gallus
 SpastENSMUSG00000024068Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FIGNL1 / Q6PIW4 / fidgetin like 1ENSG0000013243633
FIGN / Q5HY92 / fidgetin, microtubule severing factorENSG0000018226325
A6NMB9 / FIGNL2 / fidgetin like 2ENSG0000026130823
IQCA1L / IQ motif containing with AAA domain 1 likeENSG0000027868519
IQCA1 / Q86XH1 / IQ motif containing with AAA domain 1ENSG0000013232117


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR007330  MIT
 IPR015415  Vps4 oligomerisation, C-terminal
 IPR017179  Spastin
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR035106  Spastin, chordate


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000281 mitotic cytokinesis IMP
 biological_processGO:0001578 microtubule bundle formation IDA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007409 axonogenesis IEA
 biological_processGO:0008089 anterograde axonal transport ISS
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0010458 exit from mitosis IMP
 biological_processGO:0019896 axonal transport of mitochondrion ISS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0031117 positive regulation of microtubule depolymerization IEA
 biological_processGO:0031468 nuclear envelope reassembly IMP
 biological_processGO:0032467 positive regulation of cytokinesis IMP
 biological_processGO:0032506 cytokinetic process IEA
 biological_processGO:0034214 protein hexamerization IEA
 biological_processGO:0051013 microtubule severing TAS
 biological_processGO:0051228 mitotic spindle disassembly IMP
 biological_processGO:0051260 protein homooligomerization IDA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0061640 cytoskeleton-dependent cytokinesis TAS
 biological_processGO:0090148 membrane fission IMP
 cellular_componentGO:0000815 ESCRT III complex TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005811 lipid droplet IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030496 midbody IMP
 cellular_componentGO:0031410 cytoplasmic vesicle IDA
 cellular_componentGO:0031965 nuclear membrane IMP
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:1904115 axon cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0008568 microtubule-severing ATPase activity IDA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0043014 alpha-tubulin binding IPI
 molecular_functionGO:0044877 protein-containing complex binding TAS
 molecular_functionGO:0048487 beta-tubulin binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000012 Urinary urgency 
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000713 Agitation 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
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 HP:0000726 Dementia 
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 HP:0000734 Disinhibition 
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 HP:0000741 Apathy 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001348 Brisk reflexes 
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 HP:0001761 Pes cavus 
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 HP:0002061 Lower limb spasticity 
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 HP:0002064 Spastic gait 
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 HP:0002166 Decreased vibratory sense in the lower limbs "A decrease in the ability to perceive vibration in the legs." [HPO:curators]
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 HP:0002314 Degeneration of the lateral corticospinal tracts 
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 HP:0002354 Memory impairment 
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 HP:0002839 Sphincter disturbances (bladder) 
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 HP:0003419 Low back pain 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003587 Insidious onset 
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 HP:0003676 Progressive disorder 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003743 Genetic anticipation 
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 HP:0003828 Variable expressivity 
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 HP:0004302 Functional motor problems. 
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 HP:0006938 Decreased vibration sense at ankles 
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 HP:0007340 Lower limb muscle weakness "Weakness of the muscles of the legs." [HPO:curators]
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 HP:0007350 Hyperreflexia in upper limbs 
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 HP:0008969 Leg muscle stiffness 
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 HP:0010550 Paraplegia "Severe or complete weakness of both lower extremities with sparing of the upper extremities." [HPO:curators]
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 HP:0011448 Ankle clonus "Clonus is an involuntary tendon reflex that causes repeated flexion and extension of the foot. Ankle clonus is tested by rapidly flexing the foot upward." [HPO:probinson]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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