ENSG00000046604


Homo sapiens

Features
Gene ID: ENSG00000046604
  
Biological name :DSG2
  
Synonyms : desmoglein 2 / DSG2 / Q14126
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: 1
Band: q12.1
Gene start: 31498043
Gene end: 31549008
  
Corresponding Affymetrix probe sets: 1553105_s_at (Human Genome U133 Plus 2.0 Array)   217901_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000261590
Ensembl peptide - ENSP00000462503
NCBI entrez gene - 1829     See in Manteia.
OMIM - 125671
RefSeq - NM_001943
RefSeq Peptide - NP_001934
swissprot - Q14126
swissprot - J3KSI6
Ensembl - ENSG00000046604
  
Related genetic diseases (OMIM): 610193 - Arrhythmogenic right ventricular dysplasia 10, 610193
  612877 - Cardiomyopathy, dilated, 1BB, 612877
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch73-74h11.1ENSDARG00000062750Danio rerio
 DSG2ENSGALG00000015142Gallus gallus
 Dsg2ENSMUSG00000044393Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DSG4 / Q86SJ6 / desmoglein 4ENSG0000017506534
DSG3 / P32926 / desmoglein 3ENSG0000013475734
DSG1 / Q02413 / desmoglein 1ENSG0000013476032


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR009122  Desmosomal cadherin
 IPR009123  Desmoglein
 IPR013783  Immunoglobulin-like fold
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002934 desmosome organization IMP
 biological_processGO:0003165 Purkinje myocyte development IMP
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0032570 response to progesterone IEA
 biological_processGO:0060135 maternal process involved in female pregnancy IEA
 biological_processGO:0070268 cornification TAS
 biological_processGO:0086073 bundle of His cell-Purkinje myocyte adhesion involved in cell communication IMP
 biological_processGO:0086091 regulation of heart rate by cardiac conduction IMP
 biological_processGO:0098911 regulation of ventricular cardiac muscle cell action potential IMP
 cellular_componentGO:0001533 cornified envelope TAS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005911 cell-cell junction TAS
 cellular_componentGO:0009986 cell surface HDA
 cellular_componentGO:0014704 intercalated disc IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0016328 lateral plasma membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030057 desmosome IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0050839 cell adhesion molecule binding IPI
 molecular_functionGO:0086083 cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication IC


Pathways (from Reactome)
Pathway description
Apoptotic cleavage of cell adhesion proteins
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0001425 Heterogeneous 
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 HP:0001644 Dilated cardiomyopathy 
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 HP:0001645 Sudden cardiac death 
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 HP:0001874 Abnormality of neutrophil 
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 HP:0001962 Palpitations 
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 HP:0003198 Myopathy 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003457 Abnormal EMG findings "Abnormal results of investigations using electromyography (EMG)." [HPO:curators]
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 HP:0004756 Ventricular tachycardia 
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 HP:0006682 Ventricular extrasystoles "Premature ventricular contractions (PVC) or ventricular extrasystoles are premature contractions of the heart that arise in response to an impulse in the ventricles rather than the normal impulse from the sinoatrial (SA) node." [HPO:curators]
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 HP:0011663 Arrhythmogenic right ventricular cardiomyopathy "Arrhythmogenic right ventricular cardiomyopathy (ARVC) is defined histologically by the presence of progressive replacement of right ventricular myocardium with adipose and fibrous tissue often confined to a triangle of dysplasia comprising the right ventricular inflow, outflow, and apex. While these pathologic abnormalities can result in functional and morphological right ventricular abnormalities, they also occur in the left ventricle, producing a DCM phenotype, or can be present in the absence of clinically detectable structural changes in either ventricle. For the purposes of this classification, ARVC is defined by the presence of right ventricular dysfunction (global or regional), with or without left ventricular disease, in the presence of histological evidence for the disease and/or electrocardiographic abnormalities in accordance with published criteria." [pmid:17916581]
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 HP:0100578 Lipoatrophy "Localized loss of fat tissue." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000164305 CASP3 / P42574 / caspase 3  / reaction






 

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