ENSDARG00000062750


Danio rerio

Features
Gene ID: ENSDARG00000062750
  
Biological name :si:ch73-74h11.1
  
Synonyms : si:ch73-74h11.1
  
Possible biological names infered from orthology : desmoglein 1 / Desmoglein-1-alpha / Desmoglein-1-beta / Desmoglein-1-gamma / desmoglein 2 / desmoglein 3 / desmoglein 4 / DSG1 / Dsg1a / Dsg1b / Dsg1c / DSG2 / DSG3 / DSG4 / O55111 / P32926 / Q02413 / Q14126 / Q61495 / Q7TMD7 / Q7TSF0 / Q7TSF1 / Q86SJ6
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 16946132
Gene end: 16972446
  
Corresponding Affymetrix probe sets: Dr.23151.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000119724
Ensembl peptide - ENSDARP00000152886
NCBI entrez gene - 100534918     See in Manteia.
swissprot - F1R480
ZFIN ID - ZDB-GENE-091204-215
Ensembl - ENSDARG00000062750
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000017398Gallus gallus
 DSG2ENSGALG00000015142Gallus gallus
 DSG1ENSG00000134760Homo sapiens
 DSG2ENSG00000046604Homo sapiens
 DSG3ENSG00000134757Homo sapiens
 DSG4ENSG00000175065Homo sapiens
 Dsg1aENSMUSG00000069441Mus musculus
 Dsg1bENSMUSG00000061928Mus musculus
 Dsg1cENSMUSG00000034774Mus musculus
 Dsg2ENSMUSG00000044393Mus musculus
 Dsg3ENSMUSG00000056632Mus musculus
 Dsg4ENSMUSG00000001804Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdh29 / cadherin 29ENSDARG000001001319


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR009122  Desmosomal cadherin
 IPR013783  Immunoglobulin-like fold
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Apoptotic cleavage of cell adhesion proteins
Neutrophil degranulation
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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