ENSG00000059377


Homo sapiens

Features
Gene ID: ENSG00000059377
  
Biological name :TBXAS1
  
Synonyms : P24557 / TBXAS1 / thromboxane A synthase 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q34
Gene start: 139777051
Gene end: 140020325
  
Corresponding Affymetrix probe sets: 208130_s_at (Human Genome U133 Plus 2.0 Array)   236345_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000402536
Ensembl peptide - ENSP00000391567
Ensembl peptide - ENSP00000411274
Ensembl peptide - ENSP00000415892
Ensembl peptide - ENSP00000412710
Ensembl peptide - ENSP00000411326
Ensembl peptide - ENSP00000338087
Ensembl peptide - ENSP00000388612
Ensembl peptide - ENSP00000388736
Ensembl peptide - ENSP00000389414
NCBI entrez gene - 6916     See in Manteia.
OMIM - 274180
RefSeq - XM_017012572
RefSeq - NM_001061
RefSeq - NM_001130966
RefSeq - NM_001166253
RefSeq - NM_001166254
RefSeq - NM_001314028
RefSeq - NM_030984
RefSeq - XM_011516544
RefSeq - XM_017012569
RefSeq - XM_017012570
RefSeq - XM_017012571
RefSeq Peptide - NP_001124438
RefSeq Peptide - NP_001159726
RefSeq Peptide - NP_001300957
RefSeq Peptide - NP_112246
RefSeq Peptide - NP_001159725
RefSeq Peptide - NP_001052
swissprot - P24557
swissprot - A0A0A0MSK3
swissprot - Q53F23
swissprot - C9JS68
swissprot - B7Z6W1
swissprot - A0A0C4DH47
swissprot - F8WC80
swissprot - F8WD37
Ensembl - ENSG00000059377
  
Related genetic diseases (OMIM): 231095 - Ghosal hematodiaphyseal syndrome, 231095
  614158 - ?Thromboxane synthase deficiency, 614158
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbxas1ENSDARG00000002249Danio rerio
 TBXAS1ENSGALG00000012791Gallus gallus
 P36423ENSMUSG00000029925Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CYP3A4 / P08684 / cytochrome P450 family 3 subfamily A member 4ENSG0000016086833
CYP3A7 / P24462 / cytochrome P450 family 3 subfamily A member 7ENSG0000016087032
P24462 / CYP3A7-CYP3A51P / CYP3A7-CYP3A51P readthroughENSG0000028230132
CYP3A5 / P20815 / cytochrome P450 family 3 subfamily A member 5ENSG0000010625831
Q9HB55 / CYP3A43 / cytochrome P450 family 3 subfamily A member 43ENSG0000002146131
Q02318 / CYP27A1 / cytochrome P450 family 27 subfamily A member 1ENSG0000013592919
Q9Y6A2 / CYP46A1 / cytochrome P450 family 46 subfamily A member 1ENSG0000003653019
P19099 / CYP11B2 / cytochrome P450 family 11 subfamily B member 2ENSG0000017914217
O15528 / CYP27B1 / cytochrome P450 family 27 subfamily B member 1ENSG0000011101217
P15538 / CYP11B1 / cytochrome P450 family 11 subfamily B member 1ENSG0000016088217
Q07973 / CYP24A1 / cytochrome P450 family 24 subfamily A member 1ENSG0000001918616
P05108 / CYP11A1 / cytochrome P450 family 11 subfamily A member 1ENSG0000014045916
Q4G0S4 / CYP27C1 / cytochrome P450 family 27 subfamily C member 1ENSG0000018668413


Protein motifs (from Interpro)
Interpro ID Name
 IPR001128  Cytochrome P450
 IPR002401  Cytochrome P450, E-class, group I
 IPR017972  Cytochrome P450, conserved site
 IPR036396  Cytochrome P450 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001516 prostaglandin biosynthetic process IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0006690 icosanoid metabolic process TAS
 biological_processGO:0006693 prostaglandin metabolic process IEA
 biological_processGO:0019371 cyclooxygenase pathway TAS
 biological_processGO:0030644 cellular chloride ion homeostasis IEA
 biological_processGO:0045471 response to ethanol IEA
 biological_processGO:0045907 positive regulation of vasoconstriction IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0070542 response to fatty acid IEA
 cellular_componentGO:0005623 cell IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004497 monooxygenase activity IEA
 molecular_functionGO:0004796 thromboxane-A synthase activity IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0020037 heme binding IEA
 molecular_functionGO:0036134 12-hydroxyheptadecatrienoic acid synthase activity TAS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Eicosanoids
Synthesis of Prostaglandins (PG) and Thromboxanes (TX)
Defective TBXAS1 causes Ghosal hematodiaphyseal dysplasia (GHDD)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000421 Epistaxis 
Show

 HP:0000944 Abnormality of the metaphyses 
Show

 HP:0000978 Ecchymoses 
Show

 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
Show

 HP:0001873 Thrombocytopenia 
Show

 HP:0001882 Leukopenia 
Show

 HP:0001903 Anemia 
Show

 HP:0002167 Neurological speech impairment 
Show

 HP:0002644 Abnormality of the pelvis "An abnormality of the bony pelvis (pelvic girdle); which is a ring of bones connecting the vertebral column to the femurs." [HPO:curators]
Show

 HP:0002823 Abnormality of the femur "Abnormality of the femur (i.e., the thigh bone)." [HPO:curators]
Show

 HP:0002992 Abnormality of the tibia "Abnormality of the tibia (shinbone)." [HPO:curators]
Show

 HP:0003010 Prolonged bleeding time 
Show

 HP:0003103 Abnormality of cortical bone "An abnormality of cortical bone (also known as compact bone), which forms the dense surface of bones." [HPO:curators]
Show

 HP:0003312 Abnormal form of the vertebral bodies 
Show

 HP:0003812 Phenotypic variability 
Show

 HP:0004493 Craniofacial hyperostosis "Hyperostosis refers to a localized bone overgrowth process (as opposed to sclerosis, which refers to a generalized disturbance with increased bone density). This term is used for excessive growth of the craniofacial bones." [HPO:curators]
Show

 HP:0005019 Diaphyseal thickening 
Show

 HP:0005505 Refractory anemia 
Show

 HP:0005528 Bone marrow hypoplasia 
Show

 HP:0005890 Hyperostosis cranialis interna "Bony overgrowth of the internal surface of the cranial base." [HPO:curators]
Show

 HP:0006487 Bowing of the long bones 
Show

 HP:0010978 Abnormality of immune system physiology "A functional abnormality of the `immune system` (FMA:9825)." [HPO:probinson, MP:0001790]
Show

 HP:0011001 Increased bone mineral density "An abnormal increase of bone mineral density, that is, of the amount of matter per cubic centimeter of bones which is often refered to as osteosclerosis. Osteosclerosis can be detected on radiological examination as an increased whiteness (density) of affected bones." [HPO:curators]
Show

 HP:0011974 Myelofibrosis "Replacement of bone marrow by fibrous tissue." [HPO:probinson]
Show

 HP:0100252 Diaphyseal dysplasia 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr