ENSG00000111012


Homo sapiens

Features
Gene ID: ENSG00000111012
  
Biological name :CYP27B1
  
Synonyms : CYP27B1 / cytochrome P450 family 27 subfamily B member 1 / O15528
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q14.1
Gene start: 57762334
Gene end: 57768986
  
Corresponding Affymetrix probe sets: 205676_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000449472
Ensembl peptide - ENSP00000228606
Ensembl peptide - ENSP00000476959
NCBI entrez gene - 1594     See in Manteia.
OMIM - 609506
RefSeq - NM_000785
RefSeq Peptide - NP_000776
swissprot - V9GYP0
swissprot - F8VWR7
swissprot - O15528
Ensembl - ENSG00000111012
  
Related genetic diseases (OMIM): 264700 - Vitamin D-dependent rickets, type I, 264700
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cyp27b1ENSDARG00000045015Danio rerio
 O35084ENSMUSG00000006724Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q02318 / CYP27A1 / cytochrome P450 family 27 subfamily A member 1ENSG0000013592939
Q07973 / CYP24A1 / cytochrome P450 family 24 subfamily A member 1ENSG0000001918631
Q4G0S4 / CYP27C1 / cytochrome P450 family 27 subfamily C member 1ENSG0000018668431
P05108 / CYP11A1 / cytochrome P450 family 11 subfamily A member 1ENSG0000014045927
P19099 / CYP11B2 / cytochrome P450 family 11 subfamily B member 2ENSG0000017914226
P15538 / CYP11B1 / cytochrome P450 family 11 subfamily B member 1ENSG0000016088226
CYP3A5 / P20815 / cytochrome P450 family 3 subfamily A member 5ENSG0000010625823
CYP3A4 / P08684 / cytochrome P450 family 3 subfamily A member 4ENSG0000016086823
Q9HB55 / CYP3A43 / cytochrome P450 family 3 subfamily A member 43ENSG0000002146122
P24462 / CYP3A7-CYP3A51P / CYP3A7-CYP3A51P readthroughENSG0000028230121
Q9Y6A2 / CYP46A1 / cytochrome P450 family 46 subfamily A member 1ENSG0000003653021
CYP3A7 / P24462 / cytochrome P450 family 3 subfamily A member 7ENSG0000016087021
P24557 / TBXAS1 / thromboxane A synthase 1ENSG0000005937720


Protein motifs (from Interpro)
Interpro ID Name
 IPR001128  Cytochrome P450
 IPR002401  Cytochrome P450, E-class, group I
 IPR017972  Cytochrome P450, conserved site
 IPR036396  Cytochrome P450 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006766 vitamin metabolic process TAS
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0008285 negative regulation of cell proliferation IDA
 biological_processGO:0010956 negative regulation of calcidiol 1-monooxygenase activity IDA
 biological_processGO:0010980 positive regulation of vitamin D 24-hydroxylase activity IDA
 biological_processGO:0030282 bone mineralization IEP
 biological_processGO:0030308 negative regulation of cell growth IMP
 biological_processGO:0030500 regulation of bone mineralization IMP
 biological_processGO:0032496 response to lipopolysaccharide IDA
 biological_processGO:0033280 response to vitamin D IDA
 biological_processGO:0034341 response to interferon-gamma IDA
 biological_processGO:0036378 calcitriol biosynthetic process from calciol IDA
 biological_processGO:0042359 vitamin D metabolic process TAS
 biological_processGO:0042369 vitamin D catabolic process IEA
 biological_processGO:0043627 response to estrogen IEP
 biological_processGO:0045618 positive regulation of keratinocyte differentiation IMP
 biological_processGO:0046697 decidualization IEP
 biological_processGO:0055074 calcium ion homeostasis IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0070314 G1 to G0 transition IMP
 biological_processGO:0070564 positive regulation of vitamin D receptor signaling pathway IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005739 mitochondrion TAS
 cellular_componentGO:0005741 mitochondrial outer membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031966 mitochondrial membrane IEA
 molecular_functionGO:0004497 monooxygenase activity IEA
 molecular_functionGO:0004498 calcidiol 1-monooxygenase activity TAS
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0020037 heme binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Vitamin D (calciferol) metabolism
Vitamins
Defective CYP27B1 causes Rickets vitamin D-dependent 1A (VDDR1A)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0000737 Irritability 
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 HP:0000867 Secondary hyperparathyroidism 
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 HP:0000886 Deformed rib cage 
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 HP:0000893 Bulging of the costochondral junction 
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 HP:0000920 Enlargement of the costochondral junction 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001510 Growth retardation 
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 HP:0001538 Protuberant abdomen "A thrusting or bulging out of the abdomen." [HPO:curators]
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002148 Hypophosphatemia "A lower than normal level of blood phosphate." [HPO:curators]
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 HP:0002199 Seizures due to hypocalcemia 
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 HP:0002355 Difficulty walking 
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 HP:0002653 Bone pain 
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 HP:0002663 Late ossifying epiphyses 
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 HP:0002748 Rickets 
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 HP:0002752 Sparse bone trabeculae 
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 HP:0002753 Thin bony cortex "Abnormal thinning of the cortical region of bones." [HPO:curators]
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002909 Generalized aminoaciduria 
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 HP:0002979 Bowing of the legs 
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 HP:0002980 Femoral bowing "Bowing (abnormal curvature) of the femur." [HPO:curators]
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 HP:0002982 Tibial bowing "A developmental defect with posteromedial tibial angulation." [HPO:curators]
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 HP:0003013 Bulging epiphyses 
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 HP:0003020 Enlargement of the wrists 
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 HP:0003025 Irregular metaphyses 
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 HP:0003029 Enlargement of the ankles 
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 HP:0003106 Subperiosteal erosions due to secondary hyperparathyroidism 
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 HP:0003155 Elevated alkaline phosphatase "Abnormally increased serum levels of `alkaline phosphatase activity` (GO:0004035)." [HPO:probinson]
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 HP:0003165 Elevated serum parathyroid hormone (PTH) level 
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 HP:0003698 Difficulty standing 
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 HP:0004492 Widely patent fontanels and sutures "An abnormally increased width of the cranial sutures of striking degree." [HPO:curators]
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 HP:0005469 Occipital plagiocephaly "Occipital plagiocephaly can result from fusion or sclerosis of the lambdoid suture. If unilateral, this is accompanied by unilateral occipital flattening and bulging of the ispilateral frontal bone." [HPO:curators]
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 HP:0006297 Hypoplastic dental enamel 
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 HP:0009023 Abdominal wall muscle weakness 
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 HP:0010502 Fibular bowing "A developmental defect with posteromedial fibular angulation." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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