ENSG00000135929


Homo sapiens

Features
Gene ID: ENSG00000135929
  
Biological name :CYP27A1
  
Synonyms : CYP27A1 / cytochrome P450 family 27 subfamily A member 1 / Q02318
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q35
Gene start: 218781749
Gene end: 218815293
  
Corresponding Affymetrix probe sets: 203979_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000258415
Ensembl peptide - ENSP00000404945
Ensembl peptide - ENSP00000392671
NCBI entrez gene - 1593     See in Manteia.
OMIM - 606530
RefSeq - NM_000784
RefSeq - XM_017003488
RefSeq Peptide - NP_000775
swissprot - C9J1K5
swissprot - Q02318
swissprot - F8WD90
Ensembl - ENSG00000135929
  
Related genetic diseases (OMIM): 213700 - Cerebrotendinous xanthomatosis, 213700
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cyp27a1.2ENSDARG00000069186Danio rerio
 cyp27a1.4ENSDARG00000055159Danio rerio
 cyp27a7ENSDARG00000033802Danio rerio
 zgc:136333ENSDARG00000088013Danio rerio
 CYP27A1ENSGALG00000002470Gallus gallus
 Q9DBG1ENSMUSG00000026170Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O15528 / CYP27B1 / cytochrome P450 family 27 subfamily B member 1ENSG0000011101237
Q07973 / CYP24A1 / cytochrome P450 family 24 subfamily A member 1ENSG0000001918629
Q4G0S4 / CYP27C1 / cytochrome P450 family 27 subfamily C member 1ENSG0000018668427
P15538 / CYP11B1 / cytochrome P450 family 11 subfamily B member 1ENSG0000016088223
P05108 / CYP11A1 / cytochrome P450 family 11 subfamily A member 1ENSG0000014045923
CYP3A5 / P20815 / cytochrome P450 family 3 subfamily A member 5ENSG0000010625823
Q9HB55 / CYP3A43 / cytochrome P450 family 3 subfamily A member 43ENSG0000002146122
P19099 / CYP11B2 / cytochrome P450 family 11 subfamily B member 2ENSG0000017914222
CYP3A4 / P08684 / cytochrome P450 family 3 subfamily A member 4ENSG0000016086822
P24462 / CYP3A7-CYP3A51P / CYP3A7-CYP3A51P readthroughENSG0000028230121
CYP3A7 / P24462 / cytochrome P450 family 3 subfamily A member 7ENSG0000016087021
P24557 / TBXAS1 / thromboxane A synthase 1ENSG0000005937721
Q9Y6A2 / CYP46A1 / cytochrome P450 family 46 subfamily A member 1ENSG0000003653020


Protein motifs (from Interpro)
Interpro ID Name
 IPR001128  Cytochrome P450
 IPR002401  Cytochrome P450, E-class, group I
 IPR017972  Cytochrome P450, conserved site
 IPR036396  Cytochrome P450 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006699 bile acid biosynthetic process TAS
 biological_processGO:0016125 sterol metabolic process TAS
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031966 mitochondrial membrane IEA
 molecular_functionGO:0004497 monooxygenase activity IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008395 steroid hydroxylase activity TAS
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0020037 heme binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
Synthesis of bile acids and bile salts via 24-hydroxycholesterol
Synthesis of bile acids and bile salts via 27-hydroxycholesterol
Endogenous sterols
Defective CYP27A1 causes Cerebrotendinous xanthomatosis (CTX)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000504 Abnormality of vision "Abnormality of eyesight (visual perception)." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000543 Pale optic disks 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000726 Dementia 
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 HP:0000738 Hallucinations 
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 HP:0000746 Delusions 
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 HP:0000787 Kidney stones 
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0001081 Cholelithiasis 
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 HP:0001114 Xanthelasma "The presence of xanthomata in the skin of the eyelid." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001373 Joint dislocation "Displacement or malalignment of joints." [HPO:curators]
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001396 Cholestasis 
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 HP:0001658 Myocardial infarction 
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 HP:0001681 Angina pectoris 
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 HP:0002014 Diarrhea 
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 HP:0002024 Malabsorption 
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 HP:0002059 Cerebral atrophy 
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 HP:0002071 Extrapyramidal signs 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002167 Neurological speech impairment 
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0002376 Developmental regression 
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 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
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 HP:0002518 Periventricular white matter changes 
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 HP:0002621 Atherosclerosis "A condition characterized by patchy atheromas or atherosclerotic plaques which develop in the walls of medium-sized and large arteries and can lead to arterial stenosis with reduced or blocked blood flow." [HPO:curators]
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 HP:0003107 Abnormality of cholesterol metabolism 
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 HP:0003124 Hypercholesterolemia 
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 HP:0003482 EMG findings suggest axonal involvement 
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 HP:0007024 Pseudobulbar paralysis "Bilateral impairment of the function of the cranial nerves 9-12, which control musculature involved in eating, swallowing, and speech. Pseudobulbar paralysis is characterized clinically by dysarthria, dysphonia, and dysphagia with bifacial paralysis, and may be accompanied by `Pseudobulbar behavioral symptoms` (HP:0002193) such as enforced crying and laughing." [HPO:sdoelken]
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 HP:0007256 Mild pyramidal signs 
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0010845 EEG: generalized slow activity "Diffuse slowing of cerebral electrical activity recorded along the scalp by electroencephalography (EEG)." [HPO:probinson]
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 HP:0010874 Tendon xanthomatosis "The presence of xanthomas (intra-and extra-cellular accumulations of cholesterol) extensor tendons (typically over knuckles, Achilles tendon, knee, and elbows)." [HPO:probinson]
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 HP:0100291 Abnormality of central somatosensory evoked potentials 
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 HP:0100321 Abnormality of the dentate nucleus 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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