ENSG00000069431


Homo sapiens

Features
Gene ID: ENSG00000069431
  
Biological name :ABCC9
  
Synonyms : ABCC9 / ATP binding cassette subfamily C member 9 / O60706
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: p12.1
Gene start: 21797401
Gene end: 21942529
  
Corresponding Affymetrix probe sets: 1557374_at (Human Genome U133 Plus 2.0 Array)   208462_s_at (Human Genome U133 Plus 2.0 Array)   208561_at (Human Genome U133 Plus 2.0 Array)   208562_s_at (Human Genome U133 Plus 2.0 Array)   235578_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000480233
Ensembl peptide - ENSP00000442604
Ensembl peptide - ENSP00000490640
Ensembl peptide - ENSP00000261200
Ensembl peptide - ENSP00000261201
Ensembl peptide - ENSP00000317518
Ensembl peptide - ENSP00000440521
NCBI entrez gene - 10060     See in Manteia.
OMIM - 601439
RefSeq - XM_011520545
RefSeq - XM_005253284
RefSeq - XM_005253286
RefSeq - XM_005253287
RefSeq - XM_005253288
RefSeq - XM_005253289
RefSeq - XM_005253290
RefSeq - XM_006719025
RefSeq - NM_005691
RefSeq - NM_020297
RefSeq Peptide - NP_064693
RefSeq Peptide - NP_005682
swissprot - Q8N4N7
swissprot - G3V1N6
swissprot - O60706
swissprot - A0A024RAV7
swissprot - H0YFV4
Ensembl - ENSG00000069431
  
Related genetic diseases (OMIM): 239850 - Hypertrichotic osteochondrodysplasia, 239850
  608569 - Cardiomyopathy, dilated, 1O, 608569
  614050 - Atrial fibrillation, familial, 12, 614050
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abcc9ENSDARG00000015985Danio rerio
 ABCC9ENSGALG00000013244Gallus gallus
 Abcc9ENSMUSG00000030249Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCC8 / Q09428 / ATP binding cassette subfamily C member 8ENSG0000000607169
ABCC1 / P33527 / ATP binding cassette subfamily C member 1ENSG0000010322232
ABCC3 / O15438 / ATP binding cassette subfamily C member 3ENSG0000010884631
ABCC2 / Q92887 / ATP binding cassette subfamily C member 2ENSG0000002383930
ABCC5 / O15440 / ATP binding cassette subfamily C member 5ENSG0000011477027
ABCC4 / O15439 / ATP binding cassette subfamily C member 4ENSG0000012525726
ABCC12 / Q96J65 / ATP binding cassette subfamily C member 12ENSG0000014079824
ABCC11 / Q96J66 / ATP binding cassette subfamily C member 11ENSG0000012127024
CFTR / P13569 / cystic fibrosis transmembrane conductance regulatorENSG0000000162621


Protein motifs (from Interpro)
Interpro ID Name
 IPR000388  Sulphonylurea receptor
 IPR001475  ATP-binding cassette subfamily C member 9
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036640  ABC transporter type 1, transmembrane domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0010107 potassium ion import ISS
 biological_processGO:0042493 response to drug IBA
 biological_processGO:0051607 defense response to virus IMP
 biological_processGO:0055085 transmembrane transport TAS
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:0099133 ATP hydrolysis coupled anion transmembrane transport IEA
 biological_processGO:1903779 regulation of cardiac conduction TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0008282 inward rectifying potassium channel IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030017 sarcomere IEA
 cellular_componentGO:0042383 sarcolemma IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005215 transporter activity TAS
 molecular_functionGO:0005267 potassium channel activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008281 sulfonylurea receptor activity IEA
 molecular_functionGO:0015459 potassium channel regulator activity ISS
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IBA
 molecular_functionGO:0043225 ATPase-coupled anion transmembrane transporter activity TAS
 molecular_functionGO:0044325 ion channel binding IPI


Pathways (from Reactome)
Pathway description
ATP sensitive Potassium channels
ABC-family proteins mediated transport
Ion homeostasis
Defective ABCC9 causes dilated cardiomyopathy 10, familial atrial fibrillation 12 and hypertrichotic osteochondrodysplasia


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000154 Wide mouth "Abnormally wide mouth." [HPO:curators]
Show

 HP:0000158 Macroglossia "Increased length and width of the tongue." [pmid:19125428]
Show

 HP:0000179 Prominent lower lip "Increased thickness of the lower lip, leading to a prominent appearance of the lower lip." [HPO:curators]
Show

 HP:0000212 Gingival hyperplasia 
Show

 HP:0000215 Prominent upper lip 
Show

 HP:0000221 Furrowed tongue "Accentuation of the grooves on the dorsal surface of the tongue." [pmid:19125428]
Show

 HP:0000232 Everted lower lip 
Show

 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
Show

 HP:0000280 Coarse facial features 
Show

 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
Show

 HP:0000294 Low frontal hairline "A condition in which the scalp hair is present at lower than usual areas of the forehead." [HPO:curators]
Show

 HP:0000316 Hypertelorism 
Show

 HP:0000336 Prominent supraorbital ridges "Abnormal prominence of the supraorbital ridges, which are bony ridge located above the eye sockets in the area of the eyebrows." [HPO:curators]
Show

 HP:0000340 Sloping forehead "A form of the forehead that slopes from top to bottom in an anterior direction." [HPO:curators]
Show

 HP:0000343 Long philtrum 
Show

 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000414 Bulbous nose 
Show

 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
Show

 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
Show

 HP:0000470 Short neck 
Show

 HP:0000527 Long eyelashes "Mid upper eyelash length >10 mm or increased length of the eyelashes (subjective)." [pmid:19125427]
Show

 HP:0000574 Thick eyebrows 
Show

 HP:0000581 Blepharophimosis "Reduced width of the palpebral fissures." [HPO:sdoelken]
Show

 HP:0000664 Synophrys "Fusion of the left and right `eyebrow` (FMA:54237)." [HPO:probinson]
Show

 HP:0000774 Narrow chest 
Show

 HP:0000885 Broad ribs 
Show

 HP:0000926 Platyspondyly 
Show

 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
Show

 HP:0000944 Abnormality of the metaphyses 
Show

 HP:0000982 Palmoplantar keratoderma 
Show

 HP:0001004 Lymphedema 
Show

 HP:0001072 Thickened skin 
Show

 HP:0001155 Abnormality of the hand "An abnormality affecting one or both hands." [HPO:curators]
Show

 HP:0001163 Abnormality of the metacarpal bones 
Show

 HP:0001176 Large hands 
Show

 HP:0001182 Tapered fingers 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
Show

 HP:0001520 Large for gestational age "The term large for gestational age applies to babies whose birth weight lies above the 90th percentile for that gestational age." [HPO:curators]
Show

 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
Show

 HP:0001639 Hypertrophic cardiomyopathy 
Show

 HP:0001640 Cardiomegaly 
Show

 HP:0001643 Patent ductus arteriosus 
Show

 HP:0001644 Dilated cardiomyopathy 
Show

 HP:0001647 Bicuspid aortic valve "The presence of a bicuspid `aortic valve` (FMA:7236)." [HPO:probinson]
Show

 HP:0001654 Abnormality of the heart valves "An abnormality of a `Cardiac valve` (FMA:7110)." [HPO:probinson]
Show

 HP:0001698 Pericardial effusion 
Show

 HP:0001869 Deep plantar creases 
Show

 HP:0001874 Abnormality of neutrophil 
Show

 HP:0002162 Low posterior hairline 
Show

 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
Show

 HP:0002553 Arched eyebrows 
Show

 HP:0002652 Skeletal dysplasia 
Show

 HP:0002673 Coxa valga "Coxa valga is a deformity of the hip in which the angle between the femoral shaft and the femoral neck is increased compared to age-adjusted values (about 150 degrees in newborns gradually reducing to 120-130 degrees in adults)." [HPO:curators]
Show

 HP:0002690 Large sella turcica "An abnormal enlargement of the sella turcica." [HPO:curators]
Show

 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
Show

 HP:0003016 Metaphyseal widening "Abnormal widening of the metaphyseal regions of long bones." [HPO:curators]
Show

 HP:0003189 Long nose 
Show

 HP:0003198 Myopathy 
Show

 HP:0003236 Elevated serum creatine phosphokinase 
Show

 HP:0003300 Ovoid vertebral bodies 
Show

 HP:0003457 Abnormal EMG findings "Abnormal results of investigations using electromyography (EMG)." [HPO:curators]
Show

 HP:0004493 Craniofacial hyperostosis "Hyperostosis refers to a localized bone overgrowth process (as opposed to sclerosis, which refers to a generalized disturbance with increased bone density). This term is used for excessive growth of the craniofacial bones." [HPO:curators]
Show

 HP:0004540 Congenital, generalized hypertrichosis "A confluent, generalized overgrowth of silvery blonde to gray lanugo hair at birth (Hypertrichosis refers to excessive, abnormal hairiness)." [HPO:curators]
Show

 HP:0004634 Cuboid-shaped vertebral bodies 
Show

 HP:0004756 Ventricular tachycardia 
Show

 HP:0004757 paroxysmal atrial fibrillation 
Show

 HP:0004975 Erlenmeyer flask deformity of the femurs 
Show

 HP:0005129 Congenital hypertrophy of left ventricle 
Show

 HP:0005280 Depressed nasal root and bridge 
Show

 HP:0005445 Widened posterior fossa 
Show

 HP:0005616 Accelerated skeletal maturation "An abnormally increased rate of skeletal maturation. Accelerated skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
Show

 HP:0005692 Joint hyperflexibility 
Show

 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
Show

 HP:0006670 Impaired myocardial contractility 
Show

 HP:0007665 Curly eyelashes "Abnormally curly or curved eyelashes." [HPO:curators]
Show

 HP:0008822 Hypoplastic ishchiopubic rami 
Show

 HP:0009882 Hypoplasia of the distal phalanges of the hand 
Show

 HP:0009928 Ala nasi, thick "Increase in bulk of the ala nasi." [pmid:19152422]
Show

 HP:0010055 Broad hallux 
Show

 HP:0010059 Broad phalanges of the hallux 
Show

 HP:0010068 Broad 1st metatarsal 
Show

 HP:0010109 Hypoplastic/small hallux 
Show

 HP:0010285 Oral synechia "Fibrous band between the mucosal surfaces of the upper and lower alveolar ridges." [pmid:19125428]
Show

 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
Show

 HP:0012471 Thick vermilion border "Increased width of the "skin of vermilion border region of upper lip" (FMA:312645)." [HPO:probinson]
Show

 HP:0100540 Palpebral edema 
Show

 HP:0100578 Lipoatrophy "Localized loss of fat tissue." [HPO:sdoelken]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000121361 KCNJ8 / Q15842 / potassium voltage-gated channel subfamily J member 8  / complex
 ENSG00000187486 KCNJ11 / Q14654 / potassium voltage-gated channel subfamily J member 11  / complex
 ENSG00000069431 ABCC9 / O60706 / ATP binding cassette subfamily C member 9  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr