ENSG00000080561


Homo sapiens

Features
Gene ID: ENSG00000080561
  
Biological name :MID2
  
Synonyms : MID2 / midline 2 / Q9UJV3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q22.3
Gene start: 107825755
Gene end: 107927193
  
Corresponding Affymetrix probe sets: 208384_s_at (Human Genome U133 Plus 2.0 Array)   209733_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000413976
Ensembl peptide - ENSP00000262843
Ensembl peptide - ENSP00000410730
NCBI entrez gene - 11043     See in Manteia.
OMIM - 300204
RefSeq - XM_017029239
RefSeq - NM_012216
RefSeq - NM_052817
RefSeq - XM_005262062
RefSeq Peptide - NP_438112
RefSeq Peptide - NP_036348
swissprot - Q9UJV3
swissprot - A6PVI4
Ensembl - ENSG00000080561
  
Related genetic diseases (OMIM): 300928 - ?Mental retardation, X-linked 101, 300928
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mid2ENSDARG00000034871Danio rerio
 MID2ENSGALG00000003860Gallus gallus
 Mid2ENSMUSG00000000266Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MID1 / O15344 / midline 1ENSG0000010187169
TRIM9 / Q9C026 / tripartite motif containing 9ENSG0000010050524
Q6ZTA4 / TRIM67 / tripartite motif containing 67ENSG0000011928324
Q7Z4K8 / TRIM46 / tripartite motif containing 46ENSG0000016346223
Q9NQ86 / TRIM36 / tripartite motif containing 36ENSG0000015250323
FSD1 / Q9BTV5 / fibronectin type III and SPRY domain containing 1ENSG0000010525518
FSD1L / Q9BXM9 / fibronectin type III and SPRY domain containing 1 likeENSG0000010670117
Q9BYV6 / TRIM55 / tripartite motif containing 55ENSG0000014757316
Q9BYV2 / TRIM54 / tripartite motif containing 54ENSG0000013810013
Q969Q1 / TRIM63 / tripartite motif containing 63ENSG0000015802213


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003649  B-box, C-terminal
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR003961  Fibronectin type III
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR017903  COS domain
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif
 IPR033491  Probable E3 ubiquitin-protein ligase MID2
 IPR035752  TRIM1, PRY/SPRY domain
 IPR036116  Fibronectin type III superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010508 positive regulation of autophagy IMP
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032897 negative regulation of viral transcription IDA
 biological_processGO:0035372 protein localization to microtubule IMP
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IDA
 biological_processGO:0045087 innate immune response IDA
 biological_processGO:0046597 negative regulation of viral entry into host cell IDA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IMP
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IMP
 biological_processGO:1902187 negative regulation of viral release from host cell IDA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008017 microtubule binding IMP
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IDA
 molecular_functionGO:0051219 phosphoprotein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000276 Long face 
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 HP:0000400 Large ears 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000752 Hyperactivity 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0002465 Poor speech 
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 HP:0003577 Onset at birth 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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