ENSG00000147573


Homo sapiens

Features
Gene ID: ENSG00000147573
  
Biological name :TRIM55
  
Synonyms : Q9BYV6 / TRIM55 / tripartite motif containing 55
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q13.1
Gene start: 66126896
Gene end: 66175487
  
Corresponding Affymetrix probe sets: 232721_at (Human Genome U133 Plus 2.0 Array)   236175_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000276573
Ensembl peptide - ENSP00000297348
Ensembl peptide - ENSP00000323913
Ensembl peptide - ENSP00000332302
NCBI entrez gene - 84675     See in Manteia.
OMIM - 606469
RefSeq - XM_017013909
RefSeq - NM_033058
RefSeq - NM_184085
RefSeq - NM_184086
RefSeq - NM_184087
RefSeq - XM_011517614
RefSeq - XM_011517615
RefSeq - XM_011517616
RefSeq - XM_011517617
RefSeq - XM_017013908
RefSeq - XM_005251316
RefSeq - XM_011517613
RefSeq Peptide - NP_908973
RefSeq Peptide - NP_908974
RefSeq Peptide - NP_908975
RefSeq Peptide - NP_149047
swissprot - Q9BYV6
Ensembl - ENSG00000147573
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim55aENSDARG00000029596Danio rerio
 trim55bENSDARG00000058158Danio rerio
 TRIM55ENSGALG00000041327Gallus gallus
 Trim55ENSMUSG00000060913Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BYV2 / TRIM54 / tripartite motif containing 54ENSG0000013810041
Q969Q1 / TRIM63 / tripartite motif containing 63ENSG0000015802239
Q7Z4K8 / TRIM46 / tripartite motif containing 46ENSG0000016346224
Q9NQ86 / TRIM36 / tripartite motif containing 36ENSG0000015250324
MID2 / Q9UJV3 / midline 2ENSG0000008056121
MID1 / O15344 / midline 1ENSG0000010187121
Q6ZTA4 / TRIM67 / tripartite motif containing 67ENSG0000011928318
TRIM9 / Q9C026 / tripartite motif containing 9ENSG0000010050518
FSD1L / Q9BXM9 / fibronectin type III and SPRY domain containing 1 likeENSG0000010670113
FSD1 / Q9BTV5 / fibronectin type III and SPRY domain containing 1ENSG0000010525511


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017903  COS domain
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction NAS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005874 microtubule NAS
 molecular_functionGO:0004871 obsolete signal transducer activity NAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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