ENSG00000101871


Homo sapiens

Features
Gene ID: ENSG00000101871
  
Biological name :MID1
  
Synonyms : MID1 / midline 1 / O15344
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: p22.2
Gene start: 10445310
Gene end: 10833654
  
Corresponding Affymetrix probe sets: 203636_at (Human Genome U133 Plus 2.0 Array)   203637_s_at (Human Genome U133 Plus 2.0 Array)   210694_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000370164
Ensembl peptide - ENSP00000370162
Ensembl peptide - ENSP00000387771
Ensembl peptide - ENSP00000484712
Ensembl peptide - ENSP00000483707
Ensembl peptide - ENSP00000414521
Ensembl peptide - ENSP00000391154
Ensembl peptide - ENSP00000312678
Ensembl peptide - ENSP00000370156
Ensembl peptide - ENSP00000370157
Ensembl peptide - ENSP00000370159
NCBI entrez gene - 4281     See in Manteia.
OMIM - 300552
RefSeq - XM_017029542
RefSeq - NM_033289
RefSeq - NM_033290
RefSeq - XM_005274536
RefSeq - XM_005274537
RefSeq - XM_006724492
RefSeq - XM_011545525
RefSeq - XM_011545526
RefSeq - XM_011545527
RefSeq - XM_017029534
RefSeq - XM_017029535
RefSeq - XM_017029536
RefSeq - XM_017029537
RefSeq - XM_017029538
RefSeq - XM_017029539
RefSeq - XM_017029540
RefSeq - XM_017029541
RefSeq - NM_000381
RefSeq - NM_001098624
RefSeq - NM_001193277
RefSeq - NM_001193278
RefSeq - NM_001193279
RefSeq - NM_001193280
RefSeq - NM_001193281
RefSeq - NM_001347733
RefSeq Peptide - NP_001092094
RefSeq Peptide - NP_001180209
RefSeq Peptide - NP_001180210
RefSeq Peptide - NP_001334662
RefSeq Peptide - NP_150631
RefSeq Peptide - NP_150632
RefSeq Peptide - NP_000372
RefSeq Peptide - NP_001180206
RefSeq Peptide - NP_001180207
RefSeq Peptide - NP_001180208
swissprot - C9J453
swissprot - A0A087X255
swissprot - A0A087X0X0
swissprot - A0A024RBV4
swissprot - C9JZJ7
swissprot - O15344
Ensembl - ENSG00000101871
  
Related genetic diseases (OMIM): 300000 - Opitz GBBB syndrome, type I, 300000
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mid1ENSDARG00000060482Danio rerio
 MID1ENSGALG00000038504Gallus gallus
 Mid1ENSMUSG00000035299Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MID2 / Q9UJV3 / midline 2ENSG0000008056176
TRIM9 / Q9C026 / tripartite motif containing 9ENSG0000010050526
Q7Z4K8 / TRIM46 / tripartite motif containing 46ENSG0000016346226
Q9NQ86 / TRIM36 / tripartite motif containing 36ENSG0000015250326
Q6ZTA4 / TRIM67 / tripartite motif containing 67ENSG0000011928326
FSD1 / Q9BTV5 / fibronectin type III and SPRY domain containing 1ENSG0000010525519
FSD1L / Q9BXM9 / fibronectin type III and SPRY domain containing 1 likeENSG0000010670119
Q9BYV6 / TRIM55 / tripartite motif containing 55ENSG0000014757317
Q9BYV2 / TRIM54 / tripartite motif containing 54ENSG0000013810015
Q969Q1 / TRIM63 / tripartite motif containing 63ENSG0000015802215


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003649  B-box, C-terminal
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR003961  Fibronectin type III
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR017903  COS domain
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif
 IPR027727  Midline-1
 IPR036116  Fibronectin type III superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization TAS
 biological_processGO:0007026 negative regulation of microtubule depolymerization IEA
 biological_processGO:0007389 pattern specification process TAS
 biological_processGO:0032874 positive regulation of stress-activated MAPK cascade IMP
 biological_processGO:0035372 protein localization to microtubule IMP
 biological_processGO:0060333 interferon-gamma-mediated signaling pathway TAS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005875 microtubule associated complex TAS
 cellular_componentGO:0005881 cytoplasmic microtubule IDA
 cellular_componentGO:0015630 microtubule cytoskeleton IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008017 microtubule binding IMP
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IDA
 molecular_functionGO:0051219 phosphoprotein binding IPI


Pathways (from Reactome)
Pathway description
Interferon gamma signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000219 Thin upper lip 
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 HP:0000316 Hypertelorism 
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 HP:0000319 Flat philtrum 
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 HP:0000349 Widow s peak 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001425 Heterogeneous 
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 HP:0001627 Cardiac abnormality "An abnormality of the `heart` (FMA:7088)." [HPO:probinson]
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 HP:0001739 Abnormality of the nasopharynx 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002020 Gastroesophageal reflux 
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 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
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 HP:0002032 Esophageal atresia "A developmental defect resulting in complete obliteration of the lumen of the esophagus such that the esophagus ends in a blind pouch rather than connecting to the stomach." [HPO:curators]
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 HP:0002575 Tracheoesophageal fistula "An abnormal connection (fistula) between the esophagus and the trachea." [HPO:curators]
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 HP:0002835 Aspiration 
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 HP:0006783 Posterior pharyngeal cleft 
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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