ENSG00000106331


Homo sapiens

Features
Gene ID: ENSG00000106331
  
Biological name :PAX4
  
Synonyms : O43316 / paired box 4 / PAX4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: q32.1
Gene start: 127610292
Gene end: 127618114
  
Corresponding Affymetrix probe sets: 207867_at (Human Genome U133 Plus 2.0 Array)   211176_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000451923
Ensembl peptide - ENSP00000473846
Ensembl peptide - ENSP00000491782
Ensembl peptide - ENSP00000477877
Ensembl peptide - ENSP00000339906
Ensembl peptide - ENSP00000344297
Ensembl peptide - ENSP00000368014
NCBI entrez gene - 5078     See in Manteia.
OMIM - 167413
RefSeq - XM_011516276
RefSeq - NM_006193
RefSeq Peptide - NP_006184
swissprot - J3KPG0
swissprot - A0A1W2PPX4
swissprot - G3V4Q1
swissprot - O43316
swissprot - Q3KNR5
swissprot - A0A0A0MRB6
Ensembl - ENSG00000106331
  
Related genetic diseases (OMIM): 125853 - Diabetes mellitus, type 2, 125853
  612225 - Maturity-onset diabetes of the young, type IX, 612225
  612227 - {Diabetes mellitus, ketosis-prone, susceptibility to}, 612227

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pax4ENSDARG00000021336Danio rerio
 Pax4ENSMUSG00000029706Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PAX6 / P26367 / paired box 6ENSG0000000737241
PAX7 / P23759 / paired box 7ENSG0000000970935
PAX8 / Q06710 / paired box 8ENSG0000012561834
PAX5 / Q02548 / paired box 5ENSG0000019609233
PAX3 / P23760 / paired box 3ENSG0000013590333
PAX2 / Q02962 / paired box 2ENSG0000007589132
PAX1 / P15863 / paired box 1ENSG0000012581329
PAX9 / P55771 / paired box 9ENSG0000019880729


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR001523  Paired domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR033559  Paired box protein Pax-4
 IPR036388  Winged helix-like DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007623 circadian rhythm IEA
 biological_processGO:0009887 animal organ morphogenesis TAS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0031016 pancreas development IEA
 biological_processGO:0031018 endocrine pancreas development TAS
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0045595 regulation of cell differentiation IEA
 biological_processGO:0045597 positive regulation of cell differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0051591 response to cAMP IEA
 biological_processGO:0060041 retina development in camera-type eye IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001206 transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
Regulation of gene expression in endocrine-committed (NEUROG3+) progenitor cells


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000855 Insulin resistance 
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 HP:0003584 Late onset 
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 HP:0004904 Insulin-dependent maturity-onset diabetes of the young 
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 HP:0005978 Noninsulin-dependent diabetes mellitus 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr