ENSG00000128881


Homo sapiens

Features
Gene ID: ENSG00000128881
  
Biological name :TTBK2
  
Synonyms : Q6IQ55 / tau tubulin kinase 2 / TTBK2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q15.2
Gene start: 42738734
Gene end: 42920809
  
Corresponding Affymetrix probe sets: 1554293_at (Human Genome U133 Plus 2.0 Array)   1554294_s_at (Human Genome U133 Plus 2.0 Array)   1554295_x_at (Human Genome U133 Plus 2.0 Array)   1557073_s_at (Human Genome U133 Plus 2.0 Array)   213922_at (Human Genome U133 Plus 2.0 Array)   226964_at (Human Genome U133 Plus 2.0 Array)   240011_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457489
Ensembl peptide - ENSP00000457385
Ensembl peptide - ENSP00000479984
Ensembl peptide - ENSP00000267890
Ensembl peptide - ENSP00000454605
Ensembl peptide - ENSP00000455574
Ensembl peptide - ENSP00000455734
NCBI entrez gene - 146057     See in Manteia.
OMIM - 611695
RefSeq - XM_017021950
RefSeq - NM_173500
RefSeq - XM_005254171
RefSeq - XM_005254173
RefSeq - XM_006720402
RefSeq - XM_006720403
RefSeq Peptide - NP_775771
swissprot - Q8IWY7
swissprot - H3BMY7
swissprot - Q6IQ55
swissprot - H3BTY5
swissprot - A0A0B4J292
swissprot - H3BQ25
Ensembl - ENSG00000128881
  
Related genetic diseases (OMIM): 604432 - Spinocerebellar ataxia 11, 604432
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ttbk2aENSDARG00000005670Danio rerio
 ttbk2bENSDARG00000043026Danio rerio
 TTBK2ENSGALG00000009176Gallus gallus
 Ttbk2ENSMUSG00000090100Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TTBK1 / Q5TCY1 / tau tubulin kinase 1ENSG0000014621639
Z98749.3ENSG0000028390010
CSNK1E / P49674 / casein kinase 1 epsilonENSG0000021392310
CSNK1D / P48730 / casein kinase 1 deltaENSG0000014155110
Q8N752 / CSNK1A1L / casein kinase 1 alpha 1 likeENSG000001801389
P48729 / CSNK1A1 / casein kinase 1 alpha 1ENSG000001137129


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR001664  Intermediate filament protein
 IPR003054  Keratin, type II
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site
 IPR018039  Intermediate filament protein, conserved site
 IPR032444  Keratin type II head


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IGI
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0007026 negative regulation of microtubule depolymerization IDA
 biological_processGO:0007224 smoothened signaling pathway ISS
 biological_processGO:0008360 regulation of cell shape IBA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0018105 peptidyl-serine phosphorylation IDA
 biological_processGO:0021549 cerebellum development ISS
 biological_processGO:0021681 cerebellar granular layer development ISS
 biological_processGO:0021935 cerebellar granule cell precursor tangential migration ISS
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030334 regulation of cell migration IGI
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:0097711 ciliary basal body-plasma membrane docking TAS
 biological_processGO:1902817 negative regulation of protein localization to microtubule IMP
 biological_processGO:1904527 negative regulation of microtubule binding IDA
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005814 centriole IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0035869 ciliary transition zone IDA
 cellular_componentGO:0036064 ciliary basal body ISS
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0045095 keratin filament IEA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity NAS
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0019894 kinesin binding IPI
 molecular_functionGO:0050321 tau-protein kinase activity TAS
 molecular_functionGO:0051010 microtubule plus-end binding TAS


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000666 Nystagmus, horizontal 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002073 Progressive cerebellar ataxia 
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 HP:0002141 Gait imbalance 
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 HP:0002355 Difficulty walking 
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 HP:0003581 Onset in adulthood 
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 HP:0007256 Mild pyramidal signs 
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 HP:0008003 Jerky ocular pursuit movements 
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0010544 Vertical nystagmus "Vertical nystagmus may present with either up-beating or down-beating eye movements or both. When present in the straight-ahead position of gaze it is referred to as upbeat nystagmus or downbeat nystagmus." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000007047 MARK4 / Q96L34 / microtubule affinity regulating kinase 4  / complex / reaction






 

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