ENSG00000133401


Homo sapiens

Features
Gene ID: ENSG00000133401
  
Biological name :PDZD2
  
Synonyms : O15018 / PDZD2 / PDZ domain containing 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: p13.3
Gene start: 31639410
Gene end: 32110931
  
Corresponding Affymetrix probe sets: 209493_at (Human Genome U133 Plus 2.0 Array)   233025_at (Human Genome U133 Plus 2.0 Array)   233026_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000402033
Ensembl peptide - ENSP00000424901
NCBI entrez gene - 23037     See in Manteia.
OMIM - 610697
RefSeq - XM_017009246
RefSeq - XM_011513994
RefSeq - XM_011513995
RefSeq - XM_011513996
RefSeq - XM_017009245
RefSeq - NM_178140
RefSeq - XM_005248269
RefSeq - XM_005248271
RefSeq - XM_005248272
RefSeq - XM_006714460
RefSeq - XM_011513992
RefSeq - XM_011513993
RefSeq Peptide - NP_835260
swissprot - D6RF66
swissprot - A0A024RE15
swissprot - O15018
Ensembl - ENSG00000133401
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdzd2ENSDARG00000059801Danio rerio
 ENSGALG00000041089Gallus gallus
 ENSGALG00000002854Gallus gallus
 Pdzd2ENSMUSG00000022197Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
IL16 / Q14005 / interleukin 16ENSG0000017234915
MPDZ / O75970 / multiple PDZ domain crumbs cell polarity complex componentENSG0000010718612
PATJ / Q8NI35 / PATJ, crumbs cell polarity complex componentENSG0000013284911
PARD3 / Q8TEW0 / par-3 family cell polarity regulatorENSG000001484988
PARD3B / Q8TEW8 / par-3 family cell polarity regulator betaENSG000001161177
LNX2 / Q8N448 / ligand of numb-protein X 2ENSG000001395175
LNX1 / Q8TBB1 / ligand of numb-protein X 1ENSG000000722015


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0005576 extracellular region ISS
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISS
 cellular_componentGO:0005911 cell-cell junction ISS
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr