ENSMUSG00000022197


Mus musculus

Features
Gene ID: ENSMUSG00000022197
  
Biological name :Pdzd2
  
Synonyms : Pdzd2 / PDZ domain containing 2
  
Possible biological names infered from orthology : O15018
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: A1
Gene start: 12359711
Gene end: 12739924
  
Corresponding Affymetrix probe sets: 10427816 (MoGene1.0st)   1435553_at (Mouse Genome 430 2.0 Array)   1443618_at (Mouse Genome 430 2.0 Array)   1445203_at (Mouse Genome 430 2.0 Array)   1453896_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000139994
Ensembl peptide - ENSMUSP00000140939
Ensembl peptide - ENSMUSP00000140682
Ensembl peptide - ENSMUSP00000074788
NCBI entrez gene - 68070     See in Manteia.
MGI - MGI:1922394
RefSeq - XM_017316735
RefSeq - XM_006520167
RefSeq - XM_006520168
RefSeq - XM_006520169
RefSeq - XM_006520172
RefSeq - XM_017316734
RefSeq - NM_001081064
RefSeq - XM_006520159
RefSeq - XM_006520160
RefSeq - XM_006520161
RefSeq - XM_006520162
RefSeq - XM_006520163
RefSeq - XM_006520164
RefSeq - XM_006520165
RefSeq - XM_006520166
RefSeq Peptide - NP_001074533
swissprot - E9Q1M1
swissprot - A0A087WS85
swissprot - A0A087WRL4
swissprot - A0A087WQ09
Ensembl - ENSMUSG00000022197
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdzd2ENSDARG00000059801Danio rerio
 ENSGALG00000041089Gallus gallus
 ENSGALG00000002854Gallus gallus
 PDZD2ENSG00000133401Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Il16 / O54824 / Pro-interleukin-16 Interleukin-16 / Q14005* / interleukin 16*ENSMUSG0000000174113
Patj / Q63ZW7 / Mus musculus PATJ, crumbs cell polarity complex component (Patj), transcript variant 5, mRNA. / Q8NI35* / PATJ, crumbs cell polarity complex component*ENSMUSG0000006185911
Mpdz / Q8VBX6 / multiple PDZ domain protein / O75970* / multiple PDZ domain crumbs cell polarity complex component*ENSMUSG0000002840211
Pard3 / Q99NH2 / par-3 family cell polarity regulator / Q8TEW0*ENSMUSG000000258128
Pard3b / Q9CSB4 / par-3 family cell polarity regulator beta / Q8TEW8*ENSMUSG000000520627
Lnx2 / Q91XL2 / Ligand of Numb protein X 2 / Q8N448*ENSMUSG000000165205
Lnx1 / O70263 / ligand of numb-protein X 1 / Q8TBB1*ENSMUSG000000292285


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm ISO
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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