ENSG00000136698


Homo sapiens

Features
Gene ID: ENSG00000136698
  
Biological name :CFC1
  
Synonyms : CFC1 / cripto, FRL-1, cryptic family 1 / P0CG37
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q21.1
Gene start: 130592168
Gene end: 130599575
  
Corresponding Affymetrix probe sets: 223752_at (Human Genome U133 Plus 2.0 Array)   223753_s_at (Human Genome U133 Plus 2.0 Array)   236724_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000480526
Ensembl peptide - ENSP00000480843
Ensembl peptide - ENSP00000259216
NCBI entrez gene - 55997     See in Manteia.
OMIM - 605194
RefSeq - NM_001270420
RefSeq - NM_001270421
RefSeq - NM_032545
RefSeq Peptide - NP_115934
RefSeq Peptide - NP_001257349
RefSeq Peptide - NP_001257350
swissprot - P0CG37
swissprot - A0A087WX98
swissprot - A0A087WWV2
Ensembl - ENSG00000136698
  
Related genetic diseases (OMIM): 605376 - Heterotaxy, visceral, 2, autosomal, 605376
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tdgf1ENSDARG00000035095Danio rerio
 CFC1ENSGALG00000012623Gallus gallus
 Cfc1ENSMUSG00000026124Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CFC1B / P0CG36 / cripto, FRL-1, cryptic family 1BENSG00000152093100
TDGF1 / P13385 / teratocarcinoma-derived growth factor 1ENSG0000024118618


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR013032  EGF-like, conserved site
 IPR019011  Cryptic/Cripto, CFC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007368 determination of left/right symmetry NAS
 biological_processGO:0007369 gastrulation IEA
 biological_processGO:0038092 nodal signaling pathway IMP
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0038100 nodal binding IPI


Pathways (from Reactome)
Pathway description
Signaling by NODAL
Regulation of signaling by NODAL


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000316 Hypertelorism 
Show

 HP:0001660 Persistant truncus arteriosus "Persistent Truncus Arteriosus results from a failure of the truncus arteriosus to close." [HPO:curators]
Show

 HP:0001669 Transposition of the great vessels 
Show

 HP:0001674 Complete atrioventricular canal "A congenital malformation characterized by atrial septal defect, ventricular septal defect), and abnormalities of the tricuspid and mitral valves." [HPO:curators]
Show

 HP:0001680 Coarctation of aorta "Coarctation of the aorta is a narrowing or constriction of the aorta just distal to the origin of the left subclavian artery." [HPO:curators]
Show

 HP:0001696 Situs inversus "A left-right reversal (or "mirror reflection") of the anatomical location of the major thoracic and abdominal organs." [HPO:curators]
Show

 HP:0001719 Double outlet right ventricle 
Show

 HP:0001748 Polysplenia "Polysplenia is a congenital disease manifested by multiple small accessory spleens." [HPO:curators]
Show

 HP:0001939 Metabolism abnormality 
Show

 HP:0002566 Intestinal malrotation "An abnormality of the intestinal rotation and fixation that normally occurs during the development of the gut. This can lead to volvulus, or twisting of the intestine that causes obstruction and necrosis." [HPO:curators]
Show

 HP:0003363 Abdominal situs inversus "A left-right reversal (or "mirror reflection") of the anatomical location of the abdominal organs." [HPO:curators]
Show

 HP:0003829 Incomplete penetrance 
Show

 HP:0006695 Tricuspid and mitral valves are replaced by a single inlet valve 
Show

 HP:0010055 Broad hallux 
Show

 HP:0011537 Left atrial isomerism "In left atrial isomerism there is a bilateral small finger-shaped morphologically left atrial appendage joining the atrial chamber along a narrow front without an internal terminal crest." [DDD:dbrown, pmid:3408620]
Show

 HP:0011599 Mesocardia "Mesocardia is a abnormal location of the heart in which the heart is in a midline position and the longitudinal axis of the heart lies in the mid-sagittal plane." [DDD:dbrown, HPO:probinson]
Show

 HP:0100259 Postaxial polydactyly "A form of polydactyly in which the extra digit or digits are localized on the side of the fifth finger or fifth toe." [HPO:probinson]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000121989 ACVR2A / P27037 / activin A receptor type 2A  / complex
 ENSG00000123612 ACVR1C / Q8NER5 / activin A receptor type 1C  / complex
 ENSG00000135503 ACVR1B / P36896 / activin A receptor type 1B  / complex
 ENSG00000156574 NODAL / Q96S42 / nodal growth differentiation factor  / complex / reaction
 ENSG00000136698 CFC1 / P0CG37 / cripto, FRL-1, cryptic family 1  / complex
 ENSG00000130283 GDF1 / P27539 / growth differentiation factor 1  / complex / reaction
 ENSG00000243709 LEFTY1 / O75610 / left-right determination factor 1  / complex / reaction
 ENSG00000241186 TDGF1 / P13385 / teratocarcinoma-derived growth factor 1  / complex
 ENSG00000114739 ACVR2B / Q13705 / activin A receptor type 2B  / complex
 ENSG00000143768 LEFTY2 / O00292 / left-right determination factor 2  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr