ENSG00000138696


Homo sapiens

Features
Gene ID: ENSG00000138696
  
Biological name :BMPR1B
  
Synonyms : BMPR1B / bone morphogenetic protein receptor type 1B / O00238
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q22.3
Gene start: 94757968
Gene end: 95158448
  
Corresponding Affymetrix probe sets: 210523_at (Human Genome U133 Plus 2.0 Array)   229975_at (Human Genome U133 Plus 2.0 Array)   242579_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000424693
Ensembl peptide - ENSP00000421671
Ensembl peptide - ENSP00000425444
Ensembl peptide - ENSP00000426617
Ensembl peptide - ENSP00000264568
Ensembl peptide - ENSP00000378389
Ensembl peptide - ENSP00000401907
Ensembl peptide - ENSP00000421144
NCBI entrez gene - 658     See in Manteia.
OMIM - 603248
RefSeq - XM_017008561
RefSeq - NM_001256792
RefSeq - NM_001256793
RefSeq - NM_001256794
RefSeq - XM_011532201
RefSeq - XM_017008558
RefSeq - XM_017008559
RefSeq - XM_017008560
RefSeq - NM_001203
RefSeq Peptide - NP_001243723
RefSeq Peptide - NP_001194
RefSeq Peptide - NP_001243721
RefSeq Peptide - NP_001243722
swissprot - O00238
swissprot - D6RGW8
swissprot - D6RAW8
Ensembl - ENSG00000138696
  
Related genetic diseases (OMIM): 112600 - Brachydactyly, type A2, 112600
  609441 - Acromesomelic dysplasia, Demirhan type, 609441
  616849 - Brachydactyly, type A1, D, 616849
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bmpr1baENSDARG00000104100Danio rerio
 bmpr1bbENSDARG00000102742Danio rerio
 BMPR1BENSGALG00000012216Gallus gallus
 Bmpr1bENSMUSG00000052430Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BMPR1A / P36894 / bone morphogenetic protein receptor type 1AENSG0000010777969
P36897 / TGFBR1 / transforming growth factor beta receptor 1ENSG0000010679948
ACVR1B / P36896 / activin A receptor type 1BENSG0000013550347
ACVR1C / Q8NER5 / activin A receptor type 1CENSG0000012361246
ACVR1 / Q04771 / activin A receptor type 1ENSG0000011517044
ACVRL1 / P37023 / activin A receptor like type 1ENSG0000013956742
ACVR2A / P27037 / activin A receptor type 2AENSG0000012198928
P37173 / TGFBR2 / transforming growth factor beta receptor 2ENSG0000016351327
BMPR2 / Q13873 / bone morphogenetic protein receptor type 2ENSG0000020421727
ACVR2B / Q13705 / activin A receptor type 2BENSG0000011473926
AMHR2 / Q16671 / anti-Mullerian hormone receptor type 2ENSG0000013540924


Protein motifs (from Interpro)
Interpro ID Name
 IPR000333  Ser/Thr protein kinase, TGFB receptor
 IPR000472  Activin types I and II receptor domain
 IPR000719  Protein kinase domain
 IPR001245  Serine-threonine/tyrosine-protein kinase, catalytic domain
 IPR003605  GS domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IMP
 biological_processGO:0001502 cartilage condensation NAS
 biological_processGO:0001550 ovarian cumulus expansion IEA
 biological_processGO:0001654 eye development IEA
 biological_processGO:0002062 chondrocyte differentiation IEA
 biological_processGO:0002063 chondrocyte development ISS
 biological_processGO:0006468 protein phosphorylation IDA
 biological_processGO:0006954 inflammatory response IEA
 biological_processGO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway IEA
 biological_processGO:0009953 dorsal/ventral pattern formation IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0023014 signal transduction by protein phosphorylation IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030166 proteoglycan biosynthetic process ISS
 biological_processGO:0030501 positive regulation of bone mineralization IMP
 biological_processGO:0030509 BMP signaling pathway TAS
 biological_processGO:0031290 retinal ganglion cell axon guidance IEA
 biological_processGO:0032332 positive regulation of chondrocyte differentiation ISS
 biological_processGO:0035108 limb morphogenesis IMP
 biological_processGO:0042698 ovulation cycle IEA
 biological_processGO:0043010 camera-type eye development IEA
 biological_processGO:0045597 positive regulation of cell differentiation IMP
 biological_processGO:0045669 positive regulation of osteoblast differentiation IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0051216 cartilage development IEA
 biological_processGO:0060041 retina development in camera-type eye IEA
 biological_processGO:0060350 endochondral bone morphogenesis ISS
 biological_processGO:0061036 positive regulation of cartilage development ISS
 biological_processGO:0071363 cellular response to growth factor stimulus IEA
 biological_processGO:0071773 cellular response to BMP stimulus IMP
 biological_processGO:1902043 positive regulation of extrinsic apoptotic signaling pathway via death domain receptors IEA
 biological_processGO:1902731 negative regulation of chondrocyte proliferation ISS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IC
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0043235 receptor complex TAS
 cellular_componentGO:1990712 HFE-transferrin receptor complex IC
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IDA
 molecular_functionGO:0004675 transmembrane receptor protein serine/threonine kinase activity NAS
 molecular_functionGO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity IEA
 molecular_functionGO:0005025 transforming growth factor beta receptor activity, type I IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IDA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046332 SMAD binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Signaling by BMP


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000013 Hypoplastic uterus 
Show

 HP:0000446 Narrow nasal bridge 
Show

 HP:0000750 Impaired language development 
Show

 HP:0000786 Primary amenorrhea 
Show

 HP:0000815 Hypergonadotropic hypogonadism "Reduced function of the gonads (testes in males or ovaries in females) associated with excess pituitary gonadotropin secretion and resulting in delayed sexual development and growth delay." [HPO:curators]
Show

 HP:0001156 Brachydactyly 
Show

 HP:0001162 Postaxial polydactyly (hands) "Supernumerary digits located at the ulnar side of the hand." [HPO:curators]
Show

 HP:0001172 Abnormality of the thumb 
Show

 HP:0001204 Distal symphalangism "The term distal symphalangism refers to a bony fusion of the distal and middle phalanges of the digits of the hand, in other words the distal interphalangeal joint (DIJ) is missing which can be seen either on x-rays or as an absence of the distal interphalangeal finger creases." [HPO:curators]
Show

 HP:0001230 Broad metacarpals 
Show

 HP:0001231 Abnormality of the fingernails "An abnormality of the `fingernails` (FMA:54327)." [HPO:probinson]
Show

 HP:0001376 Decreased mobility of joints 
Show

 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
Show

 HP:0001522 Death in infancy 
Show

 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
Show

 HP:0001769 Broad feet "Increased width of the feet." [HPO:curators]
Show

 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
Show

 HP:0001822 Hallux valgus "Lateral deviation of the great toe (i.e., in the direction of the little toe)." [HPO:curators]
Show

 HP:0001831 Brachydactyly (feet) 
Show

 HP:0002275 Poor motor coordination 
Show

 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
Show

 HP:0002652 Skeletal dysplasia 
Show

 HP:0002818 Abnormality of the radius 
Show

 HP:0002983 Micromelia 
Show

 HP:0002990 Fibular aplasia "Absence of the fibula." [HPO:curators]
Show

 HP:0002992 Abnormality of the tibia "Abnormality of the tibia (shinbone)." [HPO:curators]
Show

 HP:0002997 Abnormality of the ulna "Ab abnormality of the ulna bone of the forearm." [HPO:curators]
Show

 HP:0003022 Hypoplasia of the ulna "Underdevelopment of the ulna." [HPO:curators]
Show

 HP:0003038 Fibular hypoplasia "Underdevelopment of the fibula." [HPO:curators]
Show

 HP:0003272 Abnormality of the hip "An abnormality of the hip joint or the surrounding anatomic region." [HPO:curators]
Show

 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
Show

 HP:0004220 Hypoplastic/small middle phalanx of the 5th finger "Absence or underdevelopment (hypoplasia) of the middle phalanx of the little (5th) finger." [HPO:curators]
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0004691 2-3 toe syndactyly "`Syndactyly` (HP:0001159) with fusion of toes two and three." [HPO:sdoelken]
Show

 HP:0005028 Widened proximal tibial metaphyses 
Show

 HP:0005048 fusion of carpal bones, especially capitate and hamate 
Show

 HP:0005736 Hypoplastic tibia 
Show

 HP:0005819 Abnormally short and broad middle phalanges 
Show

 HP:0005914 Aplasia/Hypoplasia involving the metacarpal bones "Aplasia or Hypoplasia affecting the metacarpal bones." [HPO:curators]
Show

 HP:0005930 Abnormality of the epiphyses 
Show

 HP:0006487 Bowing of the long bones 
Show

 HP:0006492 Aplasia/Hypoplasia of the fibula "Absence or underdevelopment of the fibula." [HPO:curators]
Show

 HP:0007598 Bilateral single palmar creases 
Show

 HP:0008096 Medially deviated second toe 
Show

 HP:0008368 Synostosis involving tarsal bones 
Show

 HP:0008873 Short stature, disproportionate short-limbed "A type of short stature characterized by a short limbs but an average-sized trunk." [HPO:curators]
Show

 HP:0009161 Aplasia/Hypoplasia of the middle phalanx of the 5th finger "Absence or underdevelopment (hypoplasia) of the middle phalanx of the little (5th) finger." [HPO:curators]
Show

 HP:0009182 Triangular shaped middle phalanx of the 5th finger "Triangular shaped middle phalanx of the 5th (little) finger. A triangular or so called delta shaped phalanx is a typical result after a bracket epiphysis of the affected phalanx." [HPO:curators]
Show

 HP:0009372 Type A2 Brachydactyly 
Show

 HP:0009373 Type C Brachydactyly 
Show

 HP:0009381 Hypoplastic/small fingers 
Show

 HP:0009465 Ulnar deviation of fingers 
Show

 HP:0009466 Radial deviation of fingers 
Show

 HP:0009467 Radial deviation of the 2nd finger "Displacement of the 2nd finger towards the radial side." [HPO:curators]
Show

 HP:0009495 Pseudoepiphyses of the 2nd finger "A pseudoepiphysis is a secondary ossification center distinct from the normal epiphysis." [HPO:curators]
Show

 HP:0009536 Hypoplastic/small 2nd finger "Hypoplastic/small 2nd (index) finger." [HPO:curators]
Show

 HP:0009566 Hypoplastic/small distal phalanx of the 2nd finger 
Show

 HP:0009568 Aplasia/Hypoplasia of the middle phalanx of the 2nd finger 
Show

 HP:0009575 Triangular shaped middle phalanx of the 2nd finger "Triangular shaped middle phalanx of the 2nd finger. A triangular or so called delta shaped phalanx is a typical result after a bracket epiphysis of the affected phalanx." [HPO:curators]
Show

 HP:0009601 Aplasia/Hypoplasia of the thumb "Hypoplastic/small or absent thumb." [HPO:curators]
Show

 HP:0009606 duplicated distal phalanx of the thumb "Complete duplication of the distal phalanx of the thumb. On x-ray two separate bones appear side to side." [HPO:curators]
Show

 HP:0009638 Hypoplastic/small proximal phalanx of the thumb "Hypoplastic/small proximal phalanx of the thumb. In contrast to the proximal phalanges of the digits 2-5, the proximal phalanx of the thumb is embryologically equivalent to the middle phalanges of the other digits, whereas the first metacarpal is embryologically of phalangeal origin and as such equivalent to the proximal phalanges of the other digits." [HPO:curators]
Show

 HP:0009650 Hypoplastic/small distal phalanx of the thumb "Hypoplastic/small distal/terminal phalanx of the thumb." [HPO:curators]
Show

 HP:0009684 Stippling of the epiphysis of the distal phalanx of the thumb "The presence of abnormal punctate (speckled, dot-like) calcifications in the epiphysis of the distal phalanx of the thumb." [HPO:curators]
Show

 HP:0009702 Synostosis involving the carpal bones 
Show

 HP:0009773 Symphalangism affecting the phalanges of the hand "Fusion of two or more phalangeal bones of the hand." [HPO:curators]
Show

 HP:0009778 Hypoplastic/small thumb 
Show

 HP:0009803 Hypoplastic/small phalanges of the hand 
Show

 HP:0010026 Aplasia/Hypoplasia of the 1st metacarpal "Aplasia or Hypoplasia affecting the 1st metacarpal. In contrast to the metacarpals 2-5, the first metacarpal is embryologically of phalangeal origin and as such equivalent to the proximal phalanges of the digits 2-5 (whereas the proximal phalanx of the thumb is equivalent to the middle phalanges of the other digits)." [HPO:curators]
Show

 HP:0010038 Hypoplastic/short 2nd metacarpal 
Show

 HP:0010055 Broad hallux 
Show

 HP:0010109 Hypoplastic/small hallux 
Show

 HP:0010241 Hypoplasia of the proximal phalanges of the hand 
Show

 HP:0010242 Aplasia of the proximal phalanges of the hand 
Show

 HP:0010508 Metatarsus valgus "A condition in which the anterior part of the foot rotates outward away from the midline of the body and the heel remains straight." [HPO:curators]
Show

 HP:0010579 Cone-shaped epiphyses 
Show

 HP:0010743 Hypoplasia of the metatarsal bones 
Show

 HP:0100242 Sarcoma "The presence of a `sarcoma` (MPATH:551)." [HPO:sdoelken]
Show

 HP:0100387 Aplasia of the middle phalanges of the toes 
Show

 HP:0100864 Hypoplasia of the femoral neck 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000121989 ACVR2A / P27037 / activin A receptor type 2A  / complex / reaction
 ENSG00000107779 BMPR1A / P36894 / bone morphogenetic protein receptor type 1A  / complex / reaction
 ENSG00000137834 SMAD6 / O43541 / SMAD family member 6  / reaction / complex
 ENSG00000170365 SMAD1 / Q15797 / SMAD family member 1  / reaction / complex
 ENSG00000198742 Q9HCE7 / SMURF1 / SMAD specific E3 ubiquitin protein ligase 1  / complex / reaction
 ENSG00000138696 BMPR1B / O00238 / bone morphogenetic protein receptor type 1B  / complex
 ENSG00000204217 BMPR2 / Q13873 / bone morphogenetic protein receptor type 2  / complex / reaction
 ENSG00000101665 SMAD7 / O15105 / SMAD family member 7  / complex / reaction
 ENSG00000113658 SMAD5 / Q99717 / SMAD family member 5  / reaction / complex
 ENSG00000114739 ACVR2B / Q13705 / activin A receptor type 2B  / reaction / complex
 ENSG00000108854 Q9HAU4 / SMURF2 / SMAD specific E3 ubiquitin protein ligase 2  / complex / reaction
 ENSG00000039319 Q7Z3T8 / ZFYVE16 / zinc finger FYVE-type containing 16  / complex / reaction
 ENSG00000120693 SMAD9 / O15198 / SMAD family member 9  / complex / reaction
 ENSG00000125845 BMP2 / P12643 / bone morphogenetic protein 2  / reaction / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr