ENSG00000154258


Homo sapiens

Features
Gene ID: ENSG00000154258
  
Biological name :ABCA9
  
Synonyms : ABCA9 / ATP binding cassette subfamily A member 9 / Q8IUA7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q24.2
Gene start: 68974488
Gene end: 69061064
  
Corresponding Affymetrix probe sets: 235335_at (Human Genome U133 Plus 2.0 Array)   239185_at (Human Genome U133 Plus 2.0 Array)   242541_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000342216
Ensembl peptide - ENSP00000394264
Ensembl peptide - ENSP00000465191
Ensembl peptide - ENSP00000465601
NCBI entrez gene - 10350     See in Manteia.
OMIM - 612507
RefSeq - XM_017024015
RefSeq - XM_017024011
RefSeq - XM_017024012
RefSeq - XM_017024013
RefSeq - XM_017024014
RefSeq - NM_080283
RefSeq Peptide - NP_525022
swissprot - K7EJJ0
swissprot - H0Y4U7
swissprot - Q8IUA7
Ensembl - ENSG00000154258
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000021399Gallus gallus
 ENSGALG00000021395Gallus gallus
 Abca9ENSMUSG00000041797Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCA8 / O94911 / ATP binding cassette subfamily A member 8ENSG0000014133872
ABCA10 / Q8WWZ4 / ATP binding cassette subfamily A member 10ENSG0000015426359
ABCA6 / Q8N139 / ATP binding cassette subfamily A member 6ENSG0000015426258
ABCA5 / Q8WWZ7 / ATP binding cassette subfamily A member 5ENSG0000015426541
ABCA1 / O95477 / ATP binding cassette subfamily A member 1ENSG0000016502927
ABCA4 / P78363 / ATP binding cassette subfamily A member 4ENSG0000019869126
ABCA7 / Q8IZY2 / ATP binding cassette subfamily A member 7ENSG0000006468726
ABCA3 / Q99758 / ATP binding cassette subfamily A member 3ENSG0000016797225
ABCA12 / Q86UK0 / ATP binding cassette subfamily A member 12ENSG0000014445225
ABCA13 / Q86UQ4 / ATP binding cassette subfamily A member 13ENSG0000017986925
ABCA2 / Q9BZC7 / ATP binding cassette subfamily A member 2ENSG0000010733125


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR026082  ABC transporter A
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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