ENSG00000179869


Homo sapiens

Features
Gene ID: ENSG00000179869
  
Biological name :ABCA13
  
Synonyms : ABCA13 / ATP binding cassette subfamily A member 13 / Q86UQ4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: p12.3
Gene start: 48171458
Gene end: 48647496
  
Corresponding Affymetrix probe sets: 1553295_at (Human Genome U133 Plus 2.0 Array)   1553604_at (Human Genome U133 Plus 2.0 Array)   1553605_a_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000411096
Ensembl peptide - ENSP00000409268
Ensembl peptide - ENSP00000442634
Ensembl peptide - ENSP00000389861
Ensembl peptide - ENSP00000391042
Ensembl peptide - ENSP00000396789
NCBI entrez gene - 154664     See in Manteia.
OMIM - 607807
RefSeq - XM_017011769
RefSeq - XM_011515139
RefSeq - XM_011515141
RefSeq - XM_011515142
RefSeq - XM_011515143
RefSeq - XM_011515144
RefSeq - XM_017011767
RefSeq - XM_017011768
RefSeq - NM_152701
RefSeq - XM_011515130
RefSeq - XM_011515131
RefSeq - XM_011515132
RefSeq - XM_011515133
RefSeq - XM_011515134
RefSeq - XM_011515136
RefSeq - XM_011515137
RefSeq - XM_011515138
RefSeq Peptide - NP_689914
swissprot - H0Y4D2
swissprot - H7BZI9
swissprot - F5H7B7
swissprot - A0A0A0MT16
swissprot - Q86UQ4
swissprot - H7C0U5
Ensembl - ENSG00000179869
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000013079Gallus gallus
 Abca13ENSMUSG00000004668Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCA12 / Q86UK0 / ATP binding cassette subfamily A member 12ENSG0000014445219
ABCA1 / O95477 / ATP binding cassette subfamily A member 1ENSG0000016502914
ABCA4 / P78363 / ATP binding cassette subfamily A member 4ENSG0000019869114
ABCA2 / Q9BZC7 / ATP binding cassette subfamily A member 2ENSG0000010733113
ABCA7 / Q8IZY2 / ATP binding cassette subfamily A member 7ENSG0000006468713
ABCA3 / Q99758 / ATP binding cassette subfamily A member 3ENSG0000016797211
ABCA8 / O94911 / ATP binding cassette subfamily A member 8ENSG000001413388
ABCA5 / Q8WWZ7 / ATP binding cassette subfamily A member 5ENSG000001542658
ABCA9 / Q8IUA7 / ATP binding cassette subfamily A member 9ENSG000001542588
ABCA6 / Q8N139 / ATP binding cassette subfamily A member 6ENSG000001542628
ABCA10 / Q8WWZ4 / ATP binding cassette subfamily A member 10ENSG000001542638


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR026082  ABC transporter A
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IBA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030667 secretory granule membrane TAS
 cellular_componentGO:0035577 azurophil granule membrane TAS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IBA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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