ENSG00000154262


Homo sapiens

Features
Gene ID: ENSG00000154262
  
Biological name :ABCA6
  
Synonyms : ABCA6 / ATP binding cassette subfamily A member 6 / Q8N139
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q24.3
Gene start: 69078702
Gene end: 69141888
  
Corresponding Affymetrix probe sets: 217504_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000284425
Ensembl peptide - ENSP00000466862
NCBI entrez gene - 23460     See in Manteia.
OMIM - 612504
RefSeq - XM_017024408
RefSeq - NM_080284
RefSeq - XM_017024406
RefSeq - XM_017024407
RefSeq - XM_011524574
RefSeq - XM_017024404
RefSeq - XM_017024405
RefSeq Peptide - NP_525023
swissprot - Q8N139
Ensembl - ENSG00000154262
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000021399Gallus gallus
 ENSGALG00000021395Gallus gallus
 Abca6ENSMUSG00000044749Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCA8 / O94911 / ATP binding cassette subfamily A member 8ENSG0000014133859
ABCA10 / Q8WWZ4 / ATP binding cassette subfamily A member 10ENSG0000015426359
ABCA9 / Q8IUA7 / ATP binding cassette subfamily A member 9ENSG0000015425858
ABCA5 / Q8WWZ7 / ATP binding cassette subfamily A member 5ENSG0000015426541
ABCA1 / O95477 / ATP binding cassette subfamily A member 1ENSG0000016502926
ABCA13 / Q86UQ4 / ATP binding cassette subfamily A member 13ENSG0000017986925
ABCA7 / Q8IZY2 / ATP binding cassette subfamily A member 7ENSG0000006468725
ABCA4 / P78363 / ATP binding cassette subfamily A member 4ENSG0000019869125
ABCA2 / Q9BZC7 / ATP binding cassette subfamily A member 2ENSG0000010733124
ABCA12 / Q86UK0 / ATP binding cassette subfamily A member 12ENSG0000014445224
ABCA3 / Q99758 / ATP binding cassette subfamily A member 3ENSG0000016797224


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR026082  ABC transporter A
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030368  ATP-binding cassette subfamily A member 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IBA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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