ENSG00000156113


Homo sapiens

Features
Gene ID: ENSG00000156113
  
Biological name :KCNMA1
  
Synonyms : KCNMA1 / potassium calcium-activated channel subfamily M alpha 1 / Q12791
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: q22.3
Gene start: 76869601
Gene end: 77638369
  
Corresponding Affymetrix probe sets: 214921_at (Human Genome U133 Plus 2.0 Array)   221583_s_at (Human Genome U133 Plus 2.0 Array)   221584_s_at (Human Genome U133 Plus 2.0 Array)   228414_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000482747
Ensembl peptide - ENSP00000475086
Ensembl peptide - ENSP00000485867
Ensembl peptide - ENSP00000492854
Ensembl peptide - ENSP00000492837
Ensembl peptide - ENSP00000492835
Ensembl peptide - ENSP00000492806
Ensembl peptide - ENSP00000492793
Ensembl peptide - ENSP00000492740
Ensembl peptide - ENSP00000492718
Ensembl peptide - ENSP00000492632
Ensembl peptide - ENSP00000492559
Ensembl peptide - ENSP00000492519
Ensembl peptide - ENSP00000492510
Ensembl peptide - ENSP00000492492
Ensembl peptide - ENSP00000492414
Ensembl peptide - ENSP00000492406
Ensembl peptide - ENSP00000492283
Ensembl peptide - ENSP00000492241
Ensembl peptide - ENSP00000492236
Ensembl peptide - ENSP00000492224
Ensembl peptide - ENSP00000492200
Ensembl peptide - ENSP00000492178
Ensembl peptide - ENSP00000492172
Ensembl peptide - ENSP00000492153
Ensembl peptide - ENSP00000492075
Ensembl peptide - ENSP00000492049
Ensembl peptide - ENSP00000492005
Ensembl peptide - ENSP00000491981
Ensembl peptide - ENSP00000491927
Ensembl peptide - ENSP00000491920
Ensembl peptide - ENSP00000491902
Ensembl peptide - ENSP00000491840
Ensembl peptide - ENSP00000491795
Ensembl peptide - ENSP00000491732
Ensembl peptide - ENSP00000491723
Ensembl peptide - ENSP00000491673
Ensembl peptide - ENSP00000491555
Ensembl peptide - ENSP00000491545
Ensembl peptide - ENSP00000491539
Ensembl peptide - ENSP00000491463
Ensembl peptide - ENSP00000491435
Ensembl peptide - ENSP00000491418
Ensembl peptide - ENSP00000491374
Ensembl peptide - ENSP00000491313
Ensembl peptide - ENSP00000491300
Ensembl peptide - ENSP00000491277
Ensembl peptide - ENSP00000491207
Ensembl peptide - ENSP00000491173
Ensembl peptide - ENSP00000491166
Ensembl peptide - ENSP00000491156
Ensembl peptide - ENSP00000491131
Ensembl peptide - ENSP00000491123
Ensembl peptide - ENSP00000491045
Ensembl peptide - ENSP00000491040
Ensembl peptide - ENSP00000491008
Ensembl peptide - ENSP00000490982
Ensembl peptide - ENSP00000490978
Ensembl peptide - ENSP00000490881
Ensembl peptide - ENSP00000286627
Ensembl peptide - ENSP00000286628
Ensembl peptide - ENSP00000346321
Ensembl peptide - ENSP00000361480
Ensembl peptide - ENSP00000361485
Ensembl peptide - ENSP00000361498
Ensembl peptide - ENSP00000361514
Ensembl peptide - ENSP00000361517
Ensembl peptide - ENSP00000361520
Ensembl peptide - ENSP00000385552
Ensembl peptide - ENSP00000385717
Ensembl peptide - ENSP00000385806
Ensembl peptide - ENSP00000388370
Ensembl peptide - ENSP00000396608
Ensembl peptide - ENSP00000402150
Ensembl peptide - ENSP00000473714
Ensembl peptide - ENSP00000474686
NCBI entrez gene - 3778     See in Manteia.
OMIM - 600150
RefSeq - XM_017016223
RefSeq - NM_001014797
RefSeq - NM_001161352
RefSeq - NM_001161353
RefSeq - NM_001271518
RefSeq - NM_001271519
RefSeq - NM_001271520
RefSeq - NM_001271521
RefSeq - NM_001271522
RefSeq - NM_001322829
RefSeq - NM_001322830
RefSeq - NM_001322832
RefSeq - NM_001322835
RefSeq - NM_001322836
RefSeq - NM_001322837
RefSeq - NM_001322838
RefSeq - NM_001322839
RefSeq - NM_002247
RefSeq - XM_005269776
RefSeq - XM_005269778
RefSeq - XM_005269781
RefSeq - XM_005269787
RefSeq - XM_005269789
RefSeq - XM_005269792
RefSeq - XM_005269796
RefSeq - XM_006717826
RefSeq - XM_011539773
RefSeq - XM_011539774
RefSeq - XM_011539775
RefSeq - XM_011539776
RefSeq - XM_011539777
RefSeq - XM_011539778
RefSeq - XM_011539779
RefSeq - XM_011539780
RefSeq - XM_011539781
RefSeq - XM_011539782
RefSeq - XM_011539783
RefSeq - XM_011539784
RefSeq - XM_011539785
RefSeq - XM_017016207
RefSeq - XM_017016208
RefSeq - XM_017016209
RefSeq - XM_017016210
RefSeq - XM_017016211
RefSeq - XM_017016212
RefSeq - XM_017016213
RefSeq - XM_017016214
RefSeq - XM_017016215
RefSeq - XM_017016216
RefSeq - XM_017016217
RefSeq - XM_017016218
RefSeq - XM_017016219
RefSeq - XM_017016221
RefSeq - XM_017016222
RefSeq Peptide - NP_001309765
RefSeq Peptide - NP_001309766
RefSeq Peptide - NP_001309767
RefSeq Peptide - NP_001309768
RefSeq Peptide - NP_002238
RefSeq Peptide - NP_001309759
RefSeq Peptide - NP_001014797
RefSeq Peptide - NP_001154824
RefSeq Peptide - NP_001154825
RefSeq Peptide - NP_001258447
RefSeq Peptide - NP_001258448
RefSeq Peptide - NP_001258449
RefSeq Peptide - NP_001258450
RefSeq Peptide - NP_001258451
RefSeq Peptide - NP_001309758
RefSeq Peptide - NP_001309761
RefSeq Peptide - NP_001309764
swissprot - D5MRH1
swissprot - B7ZMF5
swissprot - A0A1W2PSD3
swissprot - A0A1W2PSA7
swissprot - A0A1W2PS97
swissprot - A0A1W2PS54
swissprot - A0A1W2PRX6
swissprot - A0A1W2PRV4
swissprot - A0A1W2PRT6
swissprot - A0A1W2PRN5
swissprot - A0A1W2PRJ1
swissprot - A0A1W2PRG5
swissprot - A0A1W2PRF1
swissprot - A0A1W2PRE5
swissprot - A0A1W2PRC3
swissprot - A0A1W2PRB0
swissprot - A0A1W2PRA7
swissprot - A0A1W2PR62
swissprot - A0A1W2PR56
swissprot - A0A1W2PQZ8
swissprot - A0A1W2PQZ4
swissprot - A0A1W2PQU4
swissprot - A0A1W2PQR1
swissprot - A0A1W2PQK5
swissprot - A0A1W2PQJ9
swissprot - A0A1W2PQA0
swissprot - A0A1W2PQ93
swissprot - A0A1W2PQ61
swissprot - A0A1W2PQ53
swissprot - A0A1W2PQ39
swissprot - A0A1W2PPZ1
swissprot - A0A1W2PPY5
swissprot - A0A1W2PPX7
swissprot - A0A1W2PPT7
swissprot - A0A1W2PPS2
swissprot - A0A1W2PPQ3
swissprot - A0A1W2PPH9
swissprot - A0A1W2PP94
swissprot - A0A1W2PP76
swissprot - A0A1W2PP37
swissprot - A0A1W2PP26
swissprot - A0A1W2PP06
swissprot - A0A1W2PNY9
swissprot - A0A1W2PNY8
swissprot - A0A1W2PNY7
swissprot - A0A1W2PNX9
swissprot - A0A1W2PNW6
swissprot - A0A1W2PNQ3
swissprot - A0A1W2PNN6
swissprot - A0A1W2PNN5
swissprot - A0A1W2PNH9
swissprot - A0A1W2PNG1
swissprot - A0A0A0MSE6
swissprot - A0A1B0GWD4
swissprot - A0A0A0MRR0
swissprot - A0A0A0MRC3
swissprot - H0Y379
swissprot - H0Y382
swissprot - H0Y406
swissprot - H0Y5Z6
swissprot - J3KQ16
swissprot - Q12791
swissprot - Q5SVJ7
swissprot - Q5SVJ8
swissprot - Q5SVJ9
swissprot - Q5SVK0
swissprot - Q5SVK5
swissprot - S4R2X4
swissprot - S4R453
swissprot - A0A087WZL8
Ensembl - ENSG00000156113
  
Related genetic diseases (OMIM): 609446 - Paroxysmal nonkinesigenic dyskinesia, 3, with or without generalized epilepsy, 609446
  617643 - ?Cerebellar atrophy, developmental delay, and seizures, 617643
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01092907.1ENSDARG00000110727Danio rerio
 kcnma1aENSDARG00000079840Danio rerio
 KCNMA1ENSGALG00000004980Gallus gallus
 Kcnma1ENSMUSG00000063142Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KCNU1 / A8MYU2 / potassium calcium-activated channel subfamily U member 1ENSG0000021526238
KCNT1 / Q5JUK3 / potassium sodium-activated channel subfamily T member 1ENSG0000010714718
KCNT2 / Q6UVM3 / potassium sodium-activated channel subfamily T member 2ENSG0000016268717


Protein motifs (from Interpro)
Interpro ID Name
 IPR003148  Regulator of K+ conductance, N-terminal
 IPR003929  Potassium channel, BK, alpha subunit
 IPR005821  Ion transport domain
 IPR013099  Potassium channel domain
 IPR024939  Calcium-activated potassium channel Slo-1
 IPR028325  Voltage-gated potassium channel
 IPR036291  NAD(P)-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IDA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0006970 response to osmotic stress IDA
 biological_processGO:0030007 cellular potassium ion homeostasis IDA
 biological_processGO:0034465 response to carbon monoxide IMP
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0042391 regulation of membrane potential IDA
 biological_processGO:0043065 positive regulation of apoptotic process IMP
 biological_processGO:0045794 negative regulation of cell volume IDA
 biological_processGO:0051592 response to calcium ion IDA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0060073 micturition IDA
 biological_processGO:0060083 smooth muscle contraction involved in micturition IDA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005901 caveola IDA
 cellular_componentGO:0008076 voltage-gated potassium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003779 actin binding IDA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005249 voltage-gated potassium channel activity IEA
 molecular_functionGO:0005267 potassium channel activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0015269 calcium-activated potassium channel activity IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0060072 large conductance calcium-activated potassium channel activity IEA


Pathways (from Reactome)
Pathway description
Ca2+ activated K+ channels
cGMP effects


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000565 Esotropia 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0002069 Generalized tonic-clonic seizures "Generalized tonic-clonic seizures are `generalized seizures` (HP:0002197) in which the patient suddenly loses conciousness, the eyes roll back, and the entire body musculature undergoes tonic contractions. In the clonic phase of the seizure, there are rhythmic contractions of the musculature alternating with relaxation of all muscle groups. Loss of sphincter control during the seizure is common. This form of seizure was formerly commonly called grand mal seizure." [HPO:curators]
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 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
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 HP:0002121 Absence seizures "Recurrent absence seizures are `generalized seizures` (HP:0002197) that are characterized by a sudden cessation of motor activity and by a blank facial expression with flickering of the eyelids. There is no convulsive muscular activity or loss of postural control." [HPO:probinson]
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 HP:0006889 Mental retardation, borderline "Borderline intellectual retardation is defined as an intelligence quotient (IQ) in the range of 70-79." [HPO:curators]
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 HP:0007166 Involuntary dystonic or choreiform movements 
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 HP:0010849 EEG: spike-wave complexes (>3.5 Hz) "The presence of complexes of spikes and waves (>3.5 Hz) in electroencephalography (EEG)." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000138669 PRKG2 / Q13237 / protein kinase, cGMP-dependent, type II  / reaction
 ENSG00000197584 KCNMB2 / Q9Y691 / potassium calcium-activated channel subfamily M regulatory beta subunit 2  / complex
 ENSG00000156113 KCNMA1 / Q12791 / potassium calcium-activated channel subfamily M alpha 1  / complex
 ENSG00000145936 KCNMB1 / Q16558 / potassium calcium-activated channel subfamily M regulatory beta subunit 1  / complex
 ENSG00000171121 KCNMB3 / Q9NPA1 / potassium calcium-activated channel subfamily M regulatory beta subunit 3  / complex
 ENSG00000135643 KCNMB4 / Q86W47 / potassium calcium-activated channel subfamily M regulatory beta subunit 4  / complex
 ENSG00000185532 PRKG1 / Q13976 / protein kinase, cGMP-dependent, type I  / reaction






 

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