ENSG00000163599


Homo sapiens

Features
Gene ID: ENSG00000163599
  
Biological name :CTLA4
  
Synonyms : CTLA4 / cytotoxic T-lymphocyte associated protein 4 / P16410
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q33.2
Gene start: 203867786
Gene end: 203873960
  
Corresponding Affymetrix probe sets: 221331_x_at (Human Genome U133 Plus 2.0 Array)   231794_at (Human Genome U133 Plus 2.0 Array)   234362_s_at (Human Genome U133 Plus 2.0 Array)   234895_at (Human Genome U133 Plus 2.0 Array)   236341_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000409707
Ensembl peptide - ENSP00000417779
Ensembl peptide - ENSP00000295854
Ensembl peptide - ENSP00000303939
NCBI entrez gene - 1493     See in Manteia.
OMIM - 123890
RefSeq - NM_001037631
RefSeq - NM_005214
RefSeq Peptide - NP_001032720
RefSeq Peptide - NP_005205
swissprot - A0A0C4DH58
swissprot - P16410
Ensembl - ENSG00000163599
  
Related genetic diseases (OMIM): 616100 - Autoimmune lymphoproliferative syndrome, type V, 616100
  609755 - {Celiac disease, susceptibility to, 3}, 609755
  601388 - {Diabetes mellitus, insulin-dependent, 12}, 601388
  140300 - {Hashimoto thyroiditis}, 140300
  152700 - {Systemic lupus erythematosus, susceptibility to}, 152700
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cd28ENSDARG00000095070Danio rerio
 CTLA4ENSGALG00000008666Gallus gallus
 Ctla4ENSMUSG00000026011Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CD28 / P10747 / CD28 moleculeENSG0000017856227


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR008096  Cytotoxic T-lymphocyte antigen 4
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002250 adaptive immune response IEA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IMP
 biological_processGO:0030889 negative regulation of B cell proliferation IMP
 biological_processGO:0031295 T cell costimulation TAS
 biological_processGO:0042130 negative regulation of T cell proliferation IEA
 biological_processGO:0043065 positive regulation of apoptotic process IMP
 biological_processGO:0045589 regulation of regulatory T cell differentiation TAS
 biological_processGO:0045590 negative regulation of regulatory T cell differentiation IDA
 biological_processGO:0050777 negative regulation of immune response IEA
 biological_processGO:0050853 B cell receptor signaling pathway IMP
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0009897 external side of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045334 clathrin-coated endocytic vesicle IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 cellular_componentGO:0098636 protein complex involved in cell adhesion IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
CTLA4 inhibitory signaling
RUNX1 and FOXP3 control the development of regulatory T lymphocytes (Tregs)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000024 Prostatitis 
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 HP:0000071 Ureteral stenosis 
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 HP:0000083 Renal failure 
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 HP:0000093 Proteinuria 
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 HP:0000126 Hydronephrosis 
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 HP:0000163 Abnormality of the oral cavity "Abnormality of the opening or hollow part of the mouth." [HPO:curators]
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 HP:0000246 Sinusitis 
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 HP:0000389 Chronic otitis media 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000421 Epistaxis 
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 HP:0000488 Retinopathy 
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 HP:0000492 Abnormality of the eyelid 
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 HP:0000505 Impaired vision 
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 HP:0000520 Proptosis 
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 HP:0000656 Ectropion "An abnormal turning outward of the lower eyelid." [HPO:sdoelken]
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 HP:0000763 Sensory neuropathy "Peripheral neuropathy affecting primarily the sensory nerves." [HPO:curators]
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 HP:0000790 Hematuria "The presence of blood in the urine. Hematuria may be gross hematuria (visible to the naked eye) or microscopic hematuria (detected by dipstick or microscopic examination of the urine)." [HPO:curators]
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000864 Abnormality of the hypothalamus-pituitary axis 
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 HP:0000873 Diabetes insipidus "A state of excessive water intake and hypotonic (dilute) polyuria. Diabetes insipidus may be due to failure of vasopressin (AVP) release (central or neurogenic diabetes insipidus) or to a failure of the kidney to respond to AVP (nephrogenic diabetes insipidus)." [HPO:curators]
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 HP:0000958 Dry skin 
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 HP:0000962 Hyperkeratosis "Hyperkeratosis is thickening of the outer layer of the skin, the stratum corneum, which is composed of large, polyhedral, plate-like envelopes filled with keratin which are the dead cells that have migrated up from the stratum granulosum." [HPO:curators]
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 HP:0000964 Eczema "Eczema is a form of dermatitis. The term eczema is broadly applied to a range of persistent skin conditions and can be related to a number of underlying conditions. Manifestations of eczema can include dryness and recurring skin rashes with redness, skin edema, itching and dryness, crusting, flaking, blistering, cracking, oozing, or bleeding." [HPO:curators]
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 HP:0000969 Edema "An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body. Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability." [HPO:curators]
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 HP:0000979 Purpura 
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0000988 Skin rash 
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 HP:0000989 Pruritus "Pruritus is an itch or a sensation that makes a person want to scratch. This term refers to an abnormally increased disposition to experience pruritus." [HPO:curators]
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 HP:0001019 Erythroderma "An inflammatory exfoliative dermatosis involving nearly all of the surface of the skin. Erythroderma develops suddenly. A patchy erythema may generalize and spread to affect most of the skin. Scaling may appear in 2-6 days and be accompanied by hot, red, dry skin, malaise, and fever." [HPO:probinson]
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 HP:0001029 Poikiloderma 
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 HP:0001053 Hypopigmented skin patches 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001287 Meningitis 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001597 Abnormality of the nails "Abnormality of the fingernails or toenails." [HPO:curators]
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 HP:0001681 Angina pectoris 
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 HP:0001701 Pericarditis 
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 HP:0001733 Pancreatitis 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001824 Weight loss 
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 HP:0001890 Autoimmune hemolytic anemia 
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 HP:0001945 Fever 
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 HP:0001973 Immune thrombocytopenia 
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 HP:0001999 Facial dysmorphism 
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 HP:0002014 Diarrhea 
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 HP:0002017 Nausea and vomiting 
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 HP:0002027 Abdominal pain 
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 HP:0002091 Restrictive lung disease 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002102 Pleuritis "Inflammation of the pleura." [HPO:sdoelken]
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 HP:0002103 Abnormality of the pleura "An abnormality of the pleura, the thin, transparent membrane which covers the lungs and lines the inside of the chest walls." [HPO:curators]
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 HP:0002105 Hemoptysis "Coughing up (expectoration) of blood or blood-streaked sputum from the larynx, trachea, bronchi, or lungs." [HPO:curators]
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 HP:0002113 Pulmonary infiltrates 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002206 Pulmonary fibrosis 
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 HP:0002239 Gastrointestinal hemorrhage 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002301 Hemiplegia "Paralysis (complete loss of muscle function) in the arm, leg, and in some cases the face on one side of the body." [HPO:curators]
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 HP:0002315 Headache "Cephalgia, or pain in the head originating from the cerebral vault." [HPO:curators]
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 HP:0002633 Vasculitis 
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 HP:0002637 Cerebral ischemia 
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 HP:0002716 Lymphadenopathy 
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 HP:0002721 Immunodeficiency 
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 HP:0002788 Recurrent upper respiratory tract infections 
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 HP:0002829 Arthralgia 
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 HP:0002955 Tissue biopsy shows granulomas 
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 HP:0002960 Autoimmune disease 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003565 Elevated erythrocyte sedimentation rate 
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 HP:0003765 Psoriasis 
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 HP:0003829 Incomplete penetrance 
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 HP:0004313 Reduced immunoglobulin levels 
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 HP:0004332 Abnormality of lymphocytes 
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 HP:0004936 Venous thrombosis 
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 HP:0005214 Intestinal obstruction 
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 HP:0005561 Generalized abnormality of the bone marrow 
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 HP:0006510 Chronic obstructive pulmonary disease 
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 HP:0006535 Recurrent intrapulmonary hemorrhage 
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 HP:0006824 Cranial nerve paralysis 
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 HP:0007400 Irregular hyperpigmentation 
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 HP:0008069 Neoplasia of the skin 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0010701 Abnormal immunoglobulin level "An abnormal deviation from normal levels of immunoglobulins in blood." [HPO:probinson]
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 HP:0010783 Erythema "Redness of the skin, caused by hyperemia of the capillaries in the lower layers of the skin." [HPO:probinson]
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 HP:0011227 Elevated C-reactive protein level "An abnormal elevation of the C-reactive protein level in serum." [HPO:probinson]
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 HP:0011675 Arrhythmia "Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both." [DDD:dbrown, pmid:19063792]
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 HP:0012192 Cutaneous T-cell lymphoma "A type of T-cell lymphoma that exhibits malignant infiltration of the skin." [HPO:probinson]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0012735 Cough "A sudden, audible expulsion of air from the lungs through a partially closed glottis, preceded by inhalation." [HPO:probinson]
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 HP:0100533 Inflammatory abnormality of the eye "Inflammation of the eye, parts of the eye or the periorbital region." [HPO:sdoelken]
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 HP:0100539 Periorbital edema 
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 HP:0100725 Lichenification "Thickening and hardenining of the epidermis seen with exaggeration of normal skin lines." [HPO:probinson]
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 HP:0100749 Chest pain 
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 HP:0100758 Gangrene "A serious and potentially life-threatening condition that arises when a considerable mass of body tissue dies (necrosis)." [ISBN:9780781770873]
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 HP:0100820 Glomerulopathy "Inflammatory or noninflammatory diseases affecting the glomeruli of the nephron." [HPO:sdoelken]
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 HP:0200034 skin papules "A circumscribed, solid elevation of skin with no visible fluid, varying in size from a pinhead to less than 10mm in diameter at the widest point." [HPO:SKOEHLER]
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 HP:0200035 skin plaques "A broad papule, or confluence of papules equal to or greater than 10 mm. Has also been defined as an elevated, plateau-like lesion that is greater in its diameter than in its depth." [HPO:SKOEHLER]
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 HP:0200042 skin ulcer "A discontinuity of the skin exhibiting complete loss of the epidermis and often portions of the dermis and even subcutaneous fat." [HPO:SKOEHLER]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000121594 CD80 / P33681 / CD80 molecule  / reaction / complex
 ENSG00000114013 CD86 / P42081 / CD86 molecule  / complex / reaction
 ENSG00000179295 PTPN11 / Q06124 / protein tyrosine phosphatase, non-receptor type 11  / reaction / complex
 ENSG00000163599 CTLA4 / P16410 / cytotoxic T-lymphocyte associated protein 4  / complex






 

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