ENSG00000164674


Homo sapiens

Features
Gene ID: ENSG00000164674
  
Biological name :SYTL3
  
Synonyms : Q4VX76 / synaptotagmin like 3 / SYTL3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q25.3
Gene start: 158650014
Gene end: 158764876
  
Corresponding Affymetrix probe sets: 1561882_at (Human Genome U133 Plus 2.0 Array)   1562255_at (Human Genome U133 Plus 2.0 Array)   236864_at (Human Genome U133 Plus 2.0 Array)   238423_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000353631
Ensembl peptide - ENSP00000356048
Ensembl peptide - ENSP00000483936
Ensembl peptide - ENSP00000297239
NCBI entrez gene - 94120     See in Manteia.
RefSeq - NM_001318745
RefSeq - XM_017011499
RefSeq - NM_001009991
RefSeq - NM_001242384
RefSeq - NM_001242394
RefSeq - NM_001242395
RefSeq - XM_006715611
RefSeq - XM_011536254
RefSeq - XM_017011495
RefSeq - XM_017011496
RefSeq - XM_017011497
RefSeq - XM_017011498
RefSeq - XM_005267215
RefSeq - XM_005267218
RefSeq - XM_006715605
RefSeq - XM_006715606
RefSeq Peptide - NP_001229313
RefSeq Peptide - NP_001229323
RefSeq Peptide - NP_001229324
RefSeq Peptide - NP_001305674
RefSeq Peptide - NP_001009991
swissprot - Q4VX76
Ensembl - ENSG00000164674
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sytl3ENSDARG00000043468Danio rerio
 SYTL3ENSGALG00000013741Gallus gallus
 Sytl3ENSMUSG00000041831Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYTL5 / Q8TDW5 / synaptotagmin like 5ENSG0000014704134
SYTL4 / Q96C24 / synaptotagmin like 4ENSG0000010236233
SYTL2 / Q9HCH5 / synaptotagmin like 2ENSG0000013750127
SYTL1 / Q8IYJ3 / synaptotagmin like 1ENSG0000014276525
RPH3A / Q9Y2J0 / rabphilin 3AENSG0000008916918
DOC2B / double C2 domain betaENSG0000027263613
DOC2A / Q14183 / double C2 domain alphaENSG0000014992713


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR010911  Rab-binding domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR028704  Synaptotagmin-like protein 3
 IPR035892  C2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0019897 extrinsic component of plasma membrane IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0070382 exocytic vesicle IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005543 phospholipid binding IEA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA
 molecular_functionGO:0042043 neurexin family protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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