ENSG00000179242


Homo sapiens

Features
Gene ID: ENSG00000179242
  
Biological name :CDH4
  
Synonyms : cadherin 4 / CDH4 / P55283
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.33
Gene start: 61252426
Gene end: 61940617
  
Corresponding Affymetrix probe sets: 1563587_at (Human Genome U133 Plus 2.0 Array)   206866_at (Human Genome U133 Plus 2.0 Array)   220227_at (Human Genome U133 Plus 2.0 Array)   239485_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000484928
Ensembl peptide - ENSP00000443301
Ensembl peptide - ENSP00000480844
NCBI entrez gene - 1002     See in Manteia.
OMIM - 603006
RefSeq - NM_001252338
RefSeq - NM_001252339
RefSeq - NM_001794
RefSeq Peptide - NP_001239267
RefSeq Peptide - NP_001239268
RefSeq Peptide - NP_001785
swissprot - P55283
swissprot - A0A087WX99
Ensembl - ENSG00000179242
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh4ENSDARG00000015002Danio rerio
 CDH4ENSGALG00000005102Gallus gallus
 Cdh4ENSMUSG00000000305Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH2 / P19022 / cadherin 2ENSG0000017055865
CDH1 / P12830 / cadherin 1ENSG0000003906844
CDH3 / P22223 / cadherin 3ENSG0000006203839
CDH15 / P55291 / cadherin 15ENSG0000012991037
CDH13 / P55290 / cadherin 13ENSG0000014094530
DSC3 / Q14574 / desmocollin 3ENSG0000013476230
DSC1 / Q08554 / desmocollin 1ENSG0000013476529
DSC2 / Q02487 / desmocollin 2ENSG0000013475529
CDH26 / Q8IXH8 / cadherin 26ENSG0000012421526


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR014868  Cadherin prodomain
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0034332 adherens junction organization TAS
 biological_processGO:0045773 positive regulation of axon extension IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
CDO in myogenesis
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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