ENSG00000134755


Homo sapiens

Features
Gene ID: ENSG00000134755
  
Biological name :DSC2
  
Synonyms : desmocollin 2 / DSC2 / Q02487
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: -1
Band: q12.1
Gene start: 31058840
Gene end: 31102415
  
Corresponding Affymetrix probe sets: 204750_s_at (Human Genome U133 Plus 2.0 Array)   204751_x_at (Human Genome U133 Plus 2.0 Array)   226817_at (Human Genome U133 Plus 2.0 Array)   231033_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000251081
Ensembl peptide - ENSP00000280904
NCBI entrez gene - 1824     See in Manteia.
OMIM - 125645
RefSeq - XM_005258206
RefSeq - NM_004949
RefSeq - NM_024422
RefSeq Peptide - NP_077740
RefSeq Peptide - NP_004940
swissprot - Q02487
Ensembl - ENSG00000134755
  
Related genetic diseases (OMIM): 610476 - Arrhythmogenic right ventricular dysplasia 11 with mild palmoplantar keratoderma and woolly hair, 610476
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dsc2lENSDARG00000039677Danio rerio
 ENSGALG00000015140Gallus gallus
 Dsc2ENSMUSG00000024331Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DSC3 / Q14574 / desmocollin 3ENSG0000013476267
DSC1 / Q08554 / desmocollin 1ENSG0000013476554
CDH2 / P19022 / cadherin 2ENSG0000017055831
CDH4 / P55283 / cadherin 4ENSG0000017924230
CDH1 / P12830 / cadherin 1ENSG0000003906829
CDH3 / P22223 / cadherin 3ENSG0000006203828
CDH15 / P55291 / cadherin 15ENSG0000012991027
CDH26 / Q8IXH8 / cadherin 26ENSG0000012421525
CDH13 / P55290 / cadherin 13ENSG0000014094525


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR009122  Desmosomal cadherin
 IPR014868  Cadherin prodomain
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0009267 cellular response to starvation IEA
 biological_processGO:0031424 keratinization TAS
 biological_processGO:0070268 cornification TAS
 biological_processGO:0086042 cardiac muscle cell-cardiac muscle cell adhesion IMP
 biological_processGO:0086073 bundle of His cell-Purkinje myocyte adhesion involved in cell communication IMP
 biological_processGO:0086091 regulation of heart rate by cardiac conduction IMP
 biological_processGO:0098911 regulation of ventricular cardiac muscle cell action potential IMP
 cellular_componentGO:0001533 cornified envelope TAS
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005913 cell-cell adherens junction IEA
 cellular_componentGO:0014704 intercalated disc IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030057 desmosome IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0086083 cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication IC


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0001279 Syncope "Syncope refers to a generalized weakness of muscles with loss of postural tone, inability to stand upright, and loss of consciousness. Once the patient is in a horizontal position, blood flow to the brain is no longer hindered by gravitation and consciousness is regained. Unconsciousness usually lasts for seconds to minutes. Headache and drowsiness (which usually follow seizures) do not follow a syncopal attack. Syncope results from a sudden impairment of brain metabolism usually due to a reduction in cerebral blood flow. This term refers to an abnormally increased disposition to syncope." [HPO:curators]
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 HP:0001645 Sudden cardiac death 
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 HP:0001962 Palpitations 
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 HP:0002094 Dyspnea 
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 HP:0002224 Woolly hair 
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 HP:0004308 Ventricular arrhythmia 
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 HP:0011663 Arrhythmogenic right ventricular cardiomyopathy "Arrhythmogenic right ventricular cardiomyopathy (ARVC) is defined histologically by the presence of progressive replacement of right ventricular myocardium with adipose and fibrous tissue often confined to a triangle of dysplasia comprising the right ventricular inflow, outflow, and apex. While these pathologic abnormalities can result in functional and morphological right ventricular abnormalities, they also occur in the left ventricle, producing a DCM phenotype, or can be present in the absence of clinically detectable structural changes in either ventricle. For the purposes of this classification, ARVC is defined by the presence of right ventricular dysfunction (global or regional), with or without left ventricular disease, in the presence of histological evidence for the disease and/or electrocardiographic abnormalities in accordance with published criteria." [pmid:17916581]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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