ENSGALG00000015140


Gallus gallus

Features
Gene ID: ENSGALG00000015140
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : desmocollin 1 / desmocollin 2 / desmocollin 3 / DSC1 / DSC2 / DSC3 / P55292 / P55849 / P55850 / Q02487 / Q08554 / Q14574
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 106277511
Gene end: 106298765
  
Corresponding Affymetrix probe sets: GgaAffx.9627.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055767
Ensembl peptide - ENSGALP00000024384
NCBI entrez gene - 428527     See in Manteia.
RefSeq - XM_426081
RefSeq - XM_015282597
RefSeq - XM_015282598
RefSeq - XM_004939816
swissprot - F1NJD7
swissprot - A0A1D5PS85
Ensembl - ENSGALG00000015140
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dsc2lENSDARG00000039677Danio rerio
 DSC1ENSG00000134765Homo sapiens
 DSC2ENSG00000134755Homo sapiens
 DSC3ENSG00000134762Homo sapiens
 Dsc1ENSMUSG00000044322Mus musculus
 Dsc2ENSMUSG00000024331Mus musculus
 Dsc3ENSMUSG00000059898Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH2 / P10288 / Cadherin-2 / P15116* / P19022*ENSGALG0000001513230
CDH4 / cadherin-4 precursor / P39038* / P55283* / cadherin 4*ENSGALG0000000510229
CDH1 / cadherin 1 / P12830*ENSGALG0000000060828
CDH15 / cadherin 15 / P33146* / P55291*ENSGALG0000003004024
CDH13 / P33150 / Cadherin-13 / P55290* / Q9WTR5*ENSGALG0000000548323


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR009122  Desmosomal cadherin
 IPR014868  Cadherin prodomain
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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