ENSG00000179361


Homo sapiens

Features
Gene ID: ENSG00000179361
  
Biological name :ARID3B
  
Synonyms : ARID3B / AT-rich interaction domain 3B / Q8IVW6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q24.1
Gene start: 74541177
Gene end: 74598131
  
Corresponding Affymetrix probe sets: 218964_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000455668
Ensembl peptide - ENSP00000343126
Ensembl peptide - ENSP00000477878
NCBI entrez gene - 10620     See in Manteia.
OMIM - 612457
RefSeq - NM_006465
RefSeq - NM_001307939
RefSeq Peptide - NP_001294868
RefSeq Peptide - NP_006456
swissprot - Q8IVW6
swissprot - H3BQ92
Ensembl - ENSG00000179361
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arid3bENSDARG00000104034Danio rerio
 ARID3BENSGALG00000001376Gallus gallus
 Arid3bENSMUSG00000004661Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARID3A / Q99856 / AT-rich interaction domain 3AENSG0000011601745
A6NKF2 / ARID3C / AT-rich interaction domain 3CENSG0000020514335
ARID1B / Q8NFD5 / AT-rich interaction domain 1BENSG0000004961826
ARID1A / O14497 / AT-rich interaction domain 1AENSG0000011771325


Protein motifs (from Interpro)
Interpro ID Name
 IPR001606  ARID DNA-binding domain
 IPR023334  REKLES domain
 IPR036431  ARID DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001205 transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding NAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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