ENSG00000205143


Homo sapiens

Features
Gene ID: ENSG00000205143
  
Biological name :ARID3C
  
Synonyms : A6NKF2 / ARID3C / AT-rich interaction domain 3C
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: p13.3
Gene start: 34621379
Gene end: 34628107
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000368189
NCBI entrez gene - 138715     See in Manteia.
RefSeq - NM_001017363
RefSeq - XM_017014283
RefSeq Peptide - NP_001017363
swissprot - A6NKF2
Ensembl - ENSG00000205143
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A2BEA6ENSDARG00000067729Danio rerio
 ARID3CENSGALG00000005839Gallus gallus
 A6PWV5ENSMUSG00000066224Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARID3A / Q99856 / AT-rich interaction domain 3AENSG0000011601751
ARID3B / Q8IVW6 / AT-rich interaction domain 3BENSG0000017936147
ARID1B / Q8NFD5 / AT-rich interaction domain 1BENSG0000004961827
ARID1A / O14497 / AT-rich interaction domain 1AENSG0000011771323


Protein motifs (from Interpro)
Interpro ID Name
 IPR001606  ARID DNA-binding domain
 IPR023334  REKLES domain
 IPR036431  ARID DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0045121 membrane raft IDA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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