ENSG00000181827


Homo sapiens

Features
Gene ID: ENSG00000181827
  
Biological name :RFX7
  
Synonyms : Q2KHR2 / regulatory factor X7 / RFX7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q21.3
Gene start: 56087280
Gene end: 56243266
  
Corresponding Affymetrix probe sets: 218430_s_at (Human Genome U133 Plus 2.0 Array)   222630_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000453281
Ensembl peptide - ENSP00000453376
Ensembl peptide - ENSP00000453611
NCBI entrez gene - 64864     See in Manteia.
OMIM - 612660
RefSeq - XM_017022508
RefSeq - XM_005254603
RefSeq - XM_011521925
RefSeq - XM_017022506
RefSeq - XM_017022507
RefSeq - NM_022841
RefSeq Peptide - NP_073752
swissprot - H0YMH6
swissprot - H0YLX2
swissprot - Q2KHR2
Ensembl - ENSG00000181827
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rfx7aENSDARG00000077237Danio rerio
 rfx7bENSDARG00000103691Danio rerio
 RFX7ENSGALG00000041896Gallus gallus
 Rfx7ENSMUSG00000037674Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RFX5 / P48382 / regulatory factor X5ENSG0000014339012
RFX6 / Q8HWS3 / regulatory factor X6ENSG0000018500210
RFX1 / P22670 / regulatory factor X1ENSG000001320058
RFX3 / P48380 / regulatory factor X3ENSG000000802988
RFX2 / P48378 / regulatory factor X2ENSG000000879038
RFX4 / Q33E94 / regulatory factor X4ENSG000001117838
RFX8 / Q6ZV50 / RFX family member 8, lacking RFX DNA binding domainENSG000001964605


Protein motifs (from Interpro)
Interpro ID Name
 IPR003150  DNA-binding RFX-type winged-helix domain
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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