ENSG00000183054


Homo sapiens

Features
Gene ID: ENSG00000183054
  
Biological name :RGPD6
  
Synonyms : Q99666 / RANBP2-like and GRIP domain containing 6 / RGPD6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q13
Gene start: 110513812
Gene end: 110577185
  
Corresponding Affymetrix probe sets: 201711_x_at (Human Genome U133 Plus 2.0 Array)   210676_x_at (Human Genome U133 Plus 2.0 Array)   211324_s_at (Human Genome U133 Plus 2.0 Array)   212842_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000409424
Ensembl peptide - ENSP00000387779
Ensembl peptide - ENSP00000410084
Ensembl peptide - ENSP00000418549
Ensembl peptide - ENSP00000330023
Ensembl peptide - ENSP00000330842
NCBI entrez gene - 729540     See in Manteia.
OMIM - 612709
RefSeq - XM_017004844
RefSeq - XM_011511767
RefSeq - XM_011511769
RefSeq - XM_011511770
RefSeq - XM_017004839
RefSeq - XM_017004840
RefSeq - XM_017004841
RefSeq - XM_017004842
RefSeq - XM_017004843
RefSeq - NM_001037866
RefSeq - NM_001123363
RefSeq - XM_011511766
RefSeq Peptide - NP_001116835
RefSeq Peptide - NP_001032955
swissprot - H7BZ48
swissprot - V9HWE4
swissprot - C9J1P2
swissprot - C9JF75
swissprot - Q99666
swissprot - H0YBN8
Ensembl - ENSG00000183054
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RANBP2ENSDARG00000093125Danio rerio
 ENSGALG00000016808Gallus gallus
 Q9ERU9ENSMUSG00000003226Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RGPD5 / Q99666 / RANBP2-like and GRIP domain containing 5ENSG00000015568100
RGPD8 / O14715 / RANBP2-like and GRIP domain containing 8ENSG0000016962999
RGPD3 / A6NKT7 / RANBP2-like and GRIP domain containing 3ENSG0000015316595
RGPD4 / Q7Z3J3 / RANBP2-like and GRIP domain containing 4ENSG0000019686294
RGPD2 / P0DJD1 / RANBP2-like and GRIP domain containing 2ENSG0000018530493
RGPD1 / P0DJD0 / RANBP2-like and GRIP domain containing 1ENSG0000018762792
P49792 / RANBP2 / RAN binding protein 2ENSG0000015320191
PPIE / Q9UNP9 / peptidylprolyl isomerase EENSG000000840722
PPIA / P62937 / peptidylprolyl isomerase AENSG000001962621
AC243756.1ENSG000002703391
PPIAL4C / A0A0B4J2A2 / peptidylprolyl isomerase A like 4CENSG000002634641
P0DN37 / PPIAL4G / peptidylprolyl isomerase A like 4GENSG000002363341
Q9Y536 / PPIAL4A / peptidylprolyl isomerase A like 4AENSG000002633531
PPIAL4E / A0A075B759 / peptidylprolyl isomerase A like 4EENSG000002715671
PPIF / P30405 / peptidylprolyl isomerase FENSG000001081791
F5H284 / PPIAL4D / peptidylprolyl isomerase A like 4DENSG000002563741
P0DN26 / PPIAL4F / peptidylprolyl isomerase A like 4FENSG000002797821


Protein motifs (from Interpro)
Interpro ID Name
 IPR000156  Ran binding domain
 IPR000237  GRIP domain
 IPR001440  Tetratricopeptide repeat 1
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR011993  PH-like domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013105  Tetratricopeptide repeat 2
 IPR019734  Tetratricopeptide repeat
 IPR032023  GCC2, Rab binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046907 intracellular transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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