ENSG00000187627


Homo sapiens

Features
Gene ID: ENSG00000187627
  
Biological name :RGPD1
  
Synonyms : P0DJD0 / RANBP2-like and GRIP domain containing 1 / RGPD1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: p11.2
Gene start: 86907953
Gene end: 87013976
  
Corresponding Affymetrix probe sets: 201711_x_at (Human Genome U133 Plus 2.0 Array)   235597_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000453170
Ensembl peptide - ENSP00000402729
Ensembl peptide - ENSP00000492933
Ensembl peptide - ENSP00000492954
Ensembl peptide - ENSP00000381253
Ensembl peptide - ENSP00000386808
NCBI entrez gene - 400966     See in Manteia.
OMIM - 612704
RefSeq - XM_017004107
RefSeq - XM_011532851
RefSeq - XM_011532852
RefSeq - XM_017004103
RefSeq - XM_017004104
RefSeq - XM_017004105
RefSeq - XM_017004106
RefSeq - NM_001024457
RefSeq - XM_011532845
RefSeq - XM_011532849
RefSeq - XM_011532850
RefSeq Peptide - NP_001019628
swissprot - A0A286YES2
swissprot - F8VYC4
swissprot - H7C1V8
swissprot - A0A286YEQ5
swissprot - P0DJD0
Ensembl - ENSG00000187627
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RANBP2ENSDARG00000093125Danio rerio
 ENSGALG00000016808Gallus gallus
 Q9ERU9ENSMUSG00000003226Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RGPD2 / P0DJD1 / RANBP2-like and GRIP domain containing 2ENSG0000018530499
RGPD4 / Q7Z3J3 / RANBP2-like and GRIP domain containing 4ENSG0000019686294
RGPD3 / A6NKT7 / RANBP2-like and GRIP domain containing 3ENSG0000015316594
RGPD6 / Q99666 / RANBP2-like and GRIP domain containing 6ENSG0000018305493
RGPD8 / O14715 / RANBP2-like and GRIP domain containing 8ENSG0000016962993
RGPD5 / Q99666 / RANBP2-like and GRIP domain containing 5ENSG0000001556893
P49792 / RANBP2 / RAN binding protein 2ENSG0000015320190
PPIE / Q9UNP9 / peptidylprolyl isomerase EENSG000000840723
PPIAL4C / A0A0B4J2A2 / peptidylprolyl isomerase A like 4CENSG000002634641
PPIAL4E / A0A075B759 / peptidylprolyl isomerase A like 4EENSG000002715671
PPIF / P30405 / peptidylprolyl isomerase FENSG000001081791
F5H284 / PPIAL4D / peptidylprolyl isomerase A like 4DENSG000002563741
P0DN26 / PPIAL4F / peptidylprolyl isomerase A like 4FENSG000002797821
PPIA / P62937 / peptidylprolyl isomerase AENSG000001962621
P0DN37 / PPIAL4G / peptidylprolyl isomerase A like 4GENSG000002363341
Q9Y536 / PPIAL4A / peptidylprolyl isomerase A like 4AENSG000002633531
AC243756.1ENSG000002703391


Protein motifs (from Interpro)
Interpro ID Name
 IPR000156  Ran binding domain
 IPR000237  GRIP domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR011993  PH-like domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR032023  GCC2, Rab binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046907 intracellular transport IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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