ENSG00000186812


Homo sapiens

Features
Gene ID: ENSG00000186812
  
Biological name :ZNF397
  
Synonyms : Q8NF99 / zinc finger protein 397 / ZNF397
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: 1
Band: q12.2
Gene start: 35241030
Gene end: 35267133
  
Corresponding Affymetrix probe sets: 228927_at (Human Genome U133 Plus 2.0 Array)   229133_s_at (Human Genome U133 Plus 2.0 Array)   235270_at (Human Genome U133 Plus 2.0 Array)   235271_s_at (Human Genome U133 Plus 2.0 Array)   239339_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000472393
Ensembl peptide - ENSP00000466760
Ensembl peptide - ENSP00000468413
Ensembl peptide - ENSP00000261333
Ensembl peptide - ENSP00000331577
Ensembl peptide - ENSP00000347850
Ensembl peptide - ENSP00000464808
Ensembl peptide - ENSP00000466317
NCBI entrez gene - 84307     See in Manteia.
OMIM - 609601
RefSeq - XM_017026042
RefSeq - NM_001135178
RefSeq - NM_032347
RefSeq - XM_006722558
RefSeq - XM_011526229
RefSeq - XM_011526230
RefSeq - XM_011526231
RefSeq Peptide - NP_001128650
RefSeq Peptide - NP_115723
swissprot - M0R288
swissprot - Q8NF99
swissprot - K7EIM5
swissprot - Q96K65
swissprot - K7ERU5
Ensembl - ENSG00000186812
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Zfp397ENSMUSG00000024276Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q15776 / ZKSCAN8 / zinc finger with KRAB and SCAN domains 8ENSG0000019831545
O43309 / ZSCAN12 / zinc finger and SCAN domain containing 12ENSG0000015869140
Q86W11 / ZSCAN30 / zinc finger and SCAN domain containing 30ENSG0000018681439
P17029 / ZKSCAN1 / zinc finger with KRAB and SCAN domains 1ENSG0000010626136
Q16670 / ZSCAN26 / zinc finger and SCAN domain containing 26ENSG0000019706235
Q9Y5A6 / ZSCAN21 / zinc finger and SCAN domain containing 21ENSG0000016652934
Q96LW9 / ZSCAN31 / zinc finger and SCAN domain containing 31ENSG0000023510934
Q969J2 / ZKSCAN4 / zinc finger with KRAB and SCAN domains 4ENSG0000018762633
Q9BRR0 / ZKSCAN3 / zinc finger with KRAB and SCAN domains 3ENSG0000018929833
P49910 / ZNF165 / zinc finger protein 165ENSG0000019727932
P10073 / ZSCAN22 / zinc finger and SCAN domain containing 22ENSG0000018231831
Q9UNY5 / ZNF232 / zinc finger protein 232ENSG0000016784029
Q3MJ62 / ZSCAN23 / zinc finger and SCAN domain containing 23ENSG0000018798728
O15535 / ZSCAN9 / zinc finger and SCAN domain containing 9ENSG0000013718527
Q9H4T2 / ZSCAN16 / zinc finger and SCAN domain containing 16ENSG0000019681225
ZNF24 / P17028 / zinc finger protein 24ENSG0000017246624
Q96N95 / ZNF396 / zinc finger protein 396ENSG0000018649623


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0015630 microtubule cytoskeleton IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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