ENSG00000196812


Homo sapiens

Features
Gene ID: ENSG00000196812
  
Biological name :ZSCAN16
  
Synonyms : Q9H4T2 / zinc finger and SCAN domain containing 16 / ZSCAN16
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: p22.1
Gene start: 28124560
Gene end: 28130082
  
Corresponding Affymetrix probe sets: 219676_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000366527
NCBI entrez gene - 80345     See in Manteia.
RefSeq - NM_001320556
RefSeq - NM_001320557
RefSeq - NM_001320558
RefSeq - NM_025231
RefSeq - XM_017011324
RefSeq - NM_001320555
RefSeq Peptide - NP_001307485
RefSeq Peptide - NP_001307486
RefSeq Peptide - NP_001307487
RefSeq Peptide - NP_079507
RefSeq Peptide - NP_001307484
swissprot - Q9H4T2
Ensembl - ENSG00000196812
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZNF24 / P17028 / zinc finger protein 24ENSG0000017246649
O15535 / ZSCAN9 / zinc finger and SCAN domain containing 9ENSG0000013718549
P49910 / ZNF165 / zinc finger protein 165ENSG0000019727949
P17029 / ZKSCAN1 / zinc finger with KRAB and SCAN domains 1ENSG0000010626149
Q9BRR0 / ZKSCAN3 / zinc finger with KRAB and SCAN domains 3ENSG0000018929849
Q9Y5A6 / ZSCAN21 / zinc finger and SCAN domain containing 21ENSG0000016652948
Q969J2 / ZKSCAN4 / zinc finger with KRAB and SCAN domains 4ENSG0000018762647
Q15776 / ZKSCAN8 / zinc finger with KRAB and SCAN domains 8ENSG0000019831546
O43309 / ZSCAN12 / zinc finger and SCAN domain containing 12ENSG0000015869146
Q3MJ62 / ZSCAN23 / zinc finger and SCAN domain containing 23ENSG0000018798746
Q86W11 / ZSCAN30 / zinc finger and SCAN domain containing 30ENSG0000018681445
Q9UNY5 / ZNF232 / zinc finger protein 232ENSG0000016784044
Q96LW9 / ZSCAN31 / zinc finger and SCAN domain containing 31ENSG0000023510944
Q96N95 / ZNF396 / zinc finger protein 396ENSG0000018649643
Q16670 / ZSCAN26 / zinc finger and SCAN domain containing 26ENSG0000019706243
P10073 / ZSCAN22 / zinc finger and SCAN domain containing 22ENSG0000018231840
Q8NF99 / ZNF397 / zinc finger protein 397ENSG0000018681238


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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