ENSG00000186814


Homo sapiens

Features
Gene ID: ENSG00000186814
  
Biological name :ZSCAN30
  
Synonyms : Q86W11 / zinc finger and SCAN domain containing 30 / ZSCAN30
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: -1
Band: q12.2
Gene start: 35251058
Gene end: 35290245
  
Corresponding Affymetrix probe sets: 1557104_at (Human Genome U133 Plus 2.0 Array)   1557105_a_at (Human Genome U133 Plus 2.0 Array)   228125_at (Human Genome U133 Plus 2.0 Array)   228130_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000470677
Ensembl peptide - ENSP00000472179
Ensembl peptide - ENSP00000491237
Ensembl peptide - ENSP00000480152
Ensembl peptide - ENSP00000329738
Ensembl peptide - ENSP00000392371
Ensembl peptide - ENSP00000465046
Ensembl peptide - ENSP00000467308
Ensembl peptide - ENSP00000468180
Ensembl peptide - ENSP00000470443
NCBI entrez gene - 100101467     See in Manteia.
RefSeq - XM_017025522
RefSeq - NM_001166012
RefSeq - NM_001288711
RefSeq - XM_005258183
RefSeq - XM_006722371
RefSeq - XM_011525789
RefSeq - XM_017025515
RefSeq - XM_017025516
RefSeq - XM_017025517
RefSeq - XM_017025518
RefSeq - XM_017025519
RefSeq - XM_017025520
RefSeq - XM_017025521
RefSeq - NM_001112734
RefSeq Peptide - NP_001275640
RefSeq Peptide - NP_001106205
RefSeq Peptide - NP_001159484
swissprot - K7ERA9
swissprot - M0QZC3
swissprot - M0QZP2
swissprot - C9JCM2
swissprot - Q86W11
swissprot - A0A0C4DGV0
swissprot - M0R1Y0
swissprot - A0A1W2PP20
swissprot - K7EPB0
Ensembl - ENSG00000186814
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q15776 / ZKSCAN8 / zinc finger with KRAB and SCAN domains 8ENSG0000019831548
O43309 / ZSCAN12 / zinc finger and SCAN domain containing 12ENSG0000015869146
P17029 / ZKSCAN1 / zinc finger with KRAB and SCAN domains 1ENSG0000010626145
Q969J2 / ZKSCAN4 / zinc finger with KRAB and SCAN domains 4ENSG0000018762642
P49910 / ZNF165 / zinc finger protein 165ENSG0000019727942
Q9BRR0 / ZKSCAN3 / zinc finger with KRAB and SCAN domains 3ENSG0000018929842
Q9Y5A6 / ZSCAN21 / zinc finger and SCAN domain containing 21ENSG0000016652942
Q8NF99 / ZNF397 / zinc finger protein 397ENSG0000018681242
Q16670 / ZSCAN26 / zinc finger and SCAN domain containing 26ENSG0000019706240
P10073 / ZSCAN22 / zinc finger and SCAN domain containing 22ENSG0000018231838
Q96LW9 / ZSCAN31 / zinc finger and SCAN domain containing 31ENSG0000023510936
Q9UNY5 / ZNF232 / zinc finger protein 232ENSG0000016784036
O15535 / ZSCAN9 / zinc finger and SCAN domain containing 9ENSG0000013718534
Q3MJ62 / ZSCAN23 / zinc finger and SCAN domain containing 23ENSG0000018798733
Q9H4T2 / ZSCAN16 / zinc finger and SCAN domain containing 16ENSG0000019681232
ZNF24 / P17028 / zinc finger protein 24ENSG0000017246632
Q96N95 / ZNF396 / zinc finger protein 396ENSG0000018649629


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr