ENSG00000187626


Homo sapiens

Features
Gene ID: ENSG00000187626
  
Biological name :ZKSCAN4
  
Synonyms : Q969J2 / zinc finger with KRAB and SCAN domains 4 / ZKSCAN4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p22.1
Gene start: 28244623
Gene end: 28252224
  
Corresponding Affymetrix probe sets: 213625_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000366509
NCBI entrez gene - 387032     See in Manteia.
OMIM - 611643
RefSeq - XM_017010844
RefSeq - NM_001304506
RefSeq - NM_019110
RefSeq - XM_005249100
RefSeq - XM_006715095
RefSeq - XM_011514588
RefSeq - XM_011514589
RefSeq - XM_005249095
RefSeq - XM_005249097
RefSeq - XM_005249098
RefSeq Peptide - NP_001291435
RefSeq Peptide - NP_061983
swissprot - Q969J2
swissprot - A0A0S2Z658
Ensembl - ENSG00000187626
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Zkscan3ENSMUSG00000021327Mus musculus
 Zkscan4ENSMUSG00000054931Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BRR0 / ZKSCAN3 / zinc finger with KRAB and SCAN domains 3ENSG0000018929884
Q15776 / ZKSCAN8 / zinc finger with KRAB and SCAN domains 8ENSG0000019831543
P17029 / ZKSCAN1 / zinc finger with KRAB and SCAN domains 1ENSG0000010626142
O43309 / ZSCAN12 / zinc finger and SCAN domain containing 12ENSG0000015869139
Q9Y5A6 / ZSCAN21 / zinc finger and SCAN domain containing 21ENSG0000016652939
Q86W11 / ZSCAN30 / zinc finger and SCAN domain containing 30ENSG0000018681438
P49910 / ZNF165 / zinc finger protein 165ENSG0000019727936
Q9UNY5 / ZNF232 / zinc finger protein 232ENSG0000016784035
Q16670 / ZSCAN26 / zinc finger and SCAN domain containing 26ENSG0000019706235
P10073 / ZSCAN22 / zinc finger and SCAN domain containing 22ENSG0000018231835
O15535 / ZSCAN9 / zinc finger and SCAN domain containing 9ENSG0000013718533
Q96LW9 / ZSCAN31 / zinc finger and SCAN domain containing 31ENSG0000023510933
Q8NF99 / ZNF397 / zinc finger protein 397ENSG0000018681232
Q3MJ62 / ZSCAN23 / zinc finger and SCAN domain containing 23ENSG0000018798730
Q9H4T2 / ZSCAN16 / zinc finger and SCAN domain containing 16ENSG0000019681230
ZNF24 / P17028 / zinc finger protein 24ENSG0000017246628
Q96N95 / ZNF396 / zinc finger protein 396ENSG0000018649626


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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