ENSG00000272333


Homo sapiens

Features
Gene ID: ENSG00000272333
  
Biological name :KMT2B
  
Synonyms : KMT2B / lysine methyltransferase 2B / Q9UMN6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.12
Gene start: 35718019
Gene end: 35738878
  
Corresponding Affymetrix probe sets: 203419_at (Human Genome U133 Plus 2.0 Array)   217069_at (Human Genome U133 Plus 2.0 Array)   217075_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000398837
NCBI entrez gene - 9757     See in Manteia.
OMIM - 606834
RefSeq - XM_017027546
RefSeq - NM_014727
RefSeq - XM_017027544
RefSeq - XM_017027545
RefSeq - XM_011527561
RefSeq - XM_011527562
RefSeq Peptide - NP_055542
swissprot - Q9UMN6
Ensembl - ENSG00000272333
  
Related genetic diseases (OMIM): 617284 - Dystonia 28, childhood-onset, 617284

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 kmt2baENSDARG00000062962Danio rerio
 kmt2bbENSDARG00000060697Danio rerio
 Kmt2bENSMUSG00000006307Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KMT2A / Q03164 / lysine methyltransferase 2AENSG0000011805840
KMT2D / O14686 / lysine methyltransferase 2DENSG0000016754818
KMT2C / Q8NEZ4 / lysine methyltransferase 2CENSG0000005560918
Q9UPS6 / SETD1B / SET domain containing 1BENSG0000013971810
O15047 / SETD1A / SET domain containing 1AENSG000000993819


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR001965  Zinc finger, PHD-type
 IPR002857  Zinc finger, CXXC-type
 IPR003616  Post-SET domain
 IPR003888  FY-rich, N-terminal
 IPR003889  FY-rich, C-terminal
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR016569  Methyltransferase, trithorax
 IPR019787  Zinc finger, PHD-finger
 IPR034732  Extended PHD (ePHD) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001541 ovarian follicle development IEA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007613 memory IEA
 biological_processGO:0009994 oocyte differentiation IEA
 biological_processGO:0016458 gene silencing IEA
 biological_processGO:0030728 ovulation IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0034968 histone lysine methylation IEA
 biological_processGO:0045652 regulation of megakaryocyte differentiation TAS
 biological_processGO:0048096 chromatin-mediated maintenance of transcription NAS
 biological_processGO:0051568 histone H3-K4 methylation IMP
 biological_processGO:0051569 regulation of histone H3-K4 methylation IEA
 biological_processGO:0080182 histone H3-K4 trimethylation IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0035097 histone methyltransferase complex IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity NAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0018024 histone-lysine N-methyltransferase activity TAS
 molecular_functionGO:0042800 histone methyltransferase activity (H3-K4 specific) IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
PKMTs methylate histone lysines
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000414 Bulbous nose 
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 HP:0000483 Astigmatism 
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 HP:0000496 Abnormality of eye movement "An abnormality in voluntary or involuntary eye movements or their control." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0002544 Retrocollis 
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 HP:0003676 Progressive disorder 
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 HP:0003829 Incomplete penetrance 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0012048 Oromandibular dystonia "A kind of focal dystonia characterized by forceful contractions of the face, jaw, and/or tongue causing difficulty in opening and closing the mouth and often affecting chewing and speech." [HPO:probinson]
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 HP:0012049 Laryngeal dystonia "A form of focal dystonia that affects the vocal cords, associated with involuntary contractions of the vocal cords causing interruptions of speech and affecting the voice quality and often leading to patterned, repeated breaks in speech." [HPO:probinson]
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 HP:0040083 Toe walking 
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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