ENSGALG00000003344


Gallus gallus

Features
Gene ID: ENSGALG00000003344
  
Biological name :CLTB
  
Synonyms : clathrin light chain B / CLTB
  
Possible biological names infered from orthology : P09497 / Q6IRU5
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 10407214
Gene end: 10414162
  
Corresponding Affymetrix probe sets: GgaAffx.12216.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005281
Ensembl peptide - ENSGALP00000059441
Ensembl peptide - ENSGALP00000053603
Ensembl peptide - ENSGALP00000052831
NCBI entrez gene - 416226     See in Manteia.
RefSeq - NM_001030609
RefSeq - NM_001305576
RefSeq Peptide - NP_001292505
RefSeq Peptide - NP_001025780
swissprot - A0A1D5PJ40
swissprot - A0A1D5PL88
swissprot - A0A1L1RL11
swissprot - F1NUW5
Ensembl - ENSGALG00000003344
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cltbENSDARG00000052368Danio rerio
 CLTBENSG00000175416Homo sapiens
 CltbENSMUSG00000047547Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLTA / clathrin light chain A / P09496*ENSGALG0000001532651


Protein motifs (from Interpro)
Interpro ID Name
 IPR000996  Clathrin light chain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0072583 clathrin-dependent endocytosis IBA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030125 clathrin vesicle coat IBA
 cellular_componentGO:0030130 clathrin coat of trans-Golgi network vesicle IEA
 cellular_componentGO:0030132 clathrin coat of coated pit IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0060170 ciliary membrane IEA
 molecular_functionGO:0005198 structural molecule activity IBA
 molecular_functionGO:0032050 clathrin heavy chain binding IBA


Pathways (from Reactome)
Pathway description
Gap junction degradation
Formation of annular gap junctions
EPH-ephrin mediated repulsion of cells
Lysosome Vesicle Biogenesis
WNT5A-dependent internalization of FZD2, FZD5 and ROR2
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000042125 AP2B1 / adaptor related protein complex 2 beta 1 subunit / P63010* / Q9DBG3* / AP-2 complex subunit beta *  / complex / reaction
 ENSGALG00000008432 AP2M1 / Q5ZMP6 / AP-2 complex subunit mu / P84091* / Q96CW1* / adaptor related protein complex 2 mu 1 subunit*  / reaction / complex
 ENSGALG00000003344 CLTB / clathrin light chain B / P09497* / Q6IRU5*  / complex
 ENSGALG00000005139 CLTC / clathrin heavy chain / Q00610*  / complex
 ENSGALG00000015326 CLTA / clathrin light chain A / P09496*  / complex






 

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