ENSGALG00000004394


Gallus gallus

Features
Gene ID: ENSGALG00000004394
  
Biological name :PCBP3
  
Synonyms : PCBP3 / poly(rC) binding protein 3
  
Possible biological names infered from orthology : Mus musculus poly(rC) binding protein 3 (Pcbp3), transcript variant 2, mRNA. / P57721 / P57722
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 6693921
Gene end: 6709659
  
Corresponding Affymetrix probe sets: Gga.6755.1.S1_at (Chicken Array)   Gga.6755.1.S1_s_at (Chicken Array)   GgaAffx.26197.1.S1_at (Chicken Array)   GgaAffx.26197.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006993
NCBI entrez gene - 100858906     See in Manteia.
RefSeq - XM_004942517
RefSeq - XM_004942518
RefSeq - XM_004942520
RefSeq - XM_004942521
RefSeq - XM_004942522
RefSeq - XM_004942523
RefSeq - XM_004942525
RefSeq - XM_004942526
RefSeq - XM_004942527
RefSeq - XM_004942528
RefSeq - XM_004942529
RefSeq - XM_004942530
RefSeq - XM_004942531
RefSeq - XM_004942532
RefSeq - XM_004942533
RefSeq - XM_004942534
RefSeq - XM_004942535
RefSeq - XM_004942536
RefSeq - XM_004942537
RefSeq - XM_004942538
RefSeq - XM_004942539
RefSeq - XM_004942542
RefSeq - XM_015289241
RefSeq - XM_003641559
swissprot - E1BVU6
Ensembl - ENSGALG00000004394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcbp3ENSDARG00000054378Danio rerio
 PCBP3ENSG00000183570Homo sapiens
 Pcbp3ENSMUSG00000001120Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PCBP2* / PCBP1* / Q15366* / P60335* / Q15365* / poly(rC) binding protein 1* / poly(rC) binding protein 2*ENSGALG0000004103061
ENSGALG0000001315554
PCBP4 / poly(rC) binding protein 4 / P57723*ENSGALG0000002769553
HNRNPK* / P61978* / P61979* / Heteroous nuclear ribonucleoprotein K * / heterogeneous nuclear ribonucleoprotein K*ENSGALG0000001259131
Q5ZIQ3 / HNRNPKL / Heterogeneous nuclear ribonucleoprotein K / HNRNPK* / P61978* / P61979* / Heteroous nuclear ribonucleoprotein K *ENSGALG0000004008631
NOVA1 / NOVA alternative splicing regulator 1 / P51513* / Q9JKN6* / RNA-binding protein Nova-1 *ENSGALG0000000985027


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:1990829 C-rich single-stranded DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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