ENSGALG00000012591


Gallus gallus

Features
Gene ID: ENSGALG00000012591
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein K / Heteroous nuclear ribonucleoprotein K / HNRNPK / P61978 / P61979
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 40077218
Gene end: 40095705
  
Corresponding Affymetrix probe sets: Gga.4811.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020534
Ensembl peptide - ENSGALP00000064467
Ensembl peptide - ENSGALP00000063748
Ensembl peptide - ENSGALP00000061636
Ensembl peptide - ENSGALP00000057655
Ensembl peptide - ENSGALP00000055869
Ensembl peptide - ENSGALP00000046129
NCBI entrez gene - 427458     See in Manteia.
RefSeq - XM_425032
RefSeq - XM_004949203
RefSeq - XM_015280372
RefSeq - XM_015280373
RefSeq - XM_015280374
RefSeq - XM_015280375
RefSeq - XM_015280376
RefSeq - XM_015280377
RefSeq - XM_003643006
RefSeq - XM_004949202
swissprot - A0A1L1S010
swissprot - A0A1L1RY42
swissprot - A0A1L1RS49
swissprot - A0A1D5PXG0
swissprot - A0A1D5PSI3
swissprot - A0A1D5P0F2
swissprot - E1C453
Ensembl - ENSGALG00000012591
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpkENSDARG00000018914Danio rerio
 hnrpklENSDARG00000007034Danio rerio
 HNRNPKENSG00000165119Homo sapiens
 HnrnpkENSMUSG00000021546Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5ZIQ3 / HNRNPKL / Heterogeneous nuclear ribonucleoprotein K / HNRNPK* / P61978* / P61979* / Heteroous nuclear ribonucleoprotein K *ENSGALG0000004008697
PCBP3 / poly(rC) binding protein 3 / P57721* / P57722* / Mus musculus poly(rC) binding protein 3 (Pcbp3), transcript variant 2, mRNA.*ENSGALG0000000439425
NOVA1 / NOVA alternative splicing regulator 1 / P51513* / Q9JKN6* / RNA-binding protein Nova-1 *ENSGALG0000000985023
PCBP4 / poly(rC) binding protein 4 / P57723*ENSGALG0000002769521
PCBP2* / PCBP1* / Q15366* / P60335* / Q15365* / poly(rC) binding protein 1* / poly(rC) binding protein 2*ENSGALG0000004103021
ENSGALG0000001315514


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR012987  ROK, N-terminal
 IPR033090  Heterogeneous nuclear ribonucleoprotein K


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006396 RNA processing IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
SUMOylation of RNA binding proteins
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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