ENSMUSG00000001120


Mus musculus

Features
Gene ID: ENSMUSG00000001120
  
Biological name :Pcbp3
  
Synonyms : Mus musculus poly(rC) binding protein 3 (Pcbp3), transcript variant 2, mRNA. / P57722 / Pcbp3
  
Possible biological names infered from orthology : P57721 / poly(rC) binding protein 3
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: C1
Gene start: 76761857
Gene end: 76961887
  
Corresponding Affymetrix probe sets: 10370242 (MoGene1.0st)   1417526_at (Mouse Genome 430 2.0 Array)   1437722_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000090048
Ensembl peptide - ENSMUSP00000129465
Ensembl peptide - ENSMUSP00000134144
Ensembl peptide - ENSMUSP00000001148
Ensembl peptide - ENSMUSP00000101051
NCBI entrez gene - 59093     See in Manteia.
MGI - MGI:1890470
RefSeq - XM_017314038
RefSeq - XM_006513926
RefSeq - XM_011243516
RefSeq - XM_011243517
RefSeq - XM_017314036
RefSeq - XM_017314037
RefSeq - NM_001347216
RefSeq - NM_021568
RefSeq - XM_006513916
RefSeq - XM_006513917
RefSeq - XM_006513918
RefSeq - XM_006513919
RefSeq - XM_006513920
RefSeq - XM_006513921
RefSeq - XM_006513922
RefSeq - XM_006513923
RefSeq - XM_006513925
RefSeq Peptide - NP_001334145
RefSeq Peptide - NP_067543
swissprot - G3UYM5
swissprot - P57722
swissprot - E9Q7D8
Ensembl - ENSMUSG00000001120
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcbp3ENSDARG00000054378Danio rerio
 PCBP3ENSGALG00000004394Gallus gallus
 PCBP3ENSG00000183570Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcbp2 / Q61990 / Poly(rC)-binding protein 2 ENSMUSG0000005685171
Pcbp1 / P60335 / Poly(rC)-binding protein 1 / Q15365*ENSMUSG0000005169564
Pcbp4 / poly(rC) binding protein 4 / P57723*ENSMUSG0000002349553
Hnrnpk / P61979 / Heteroous nuclear ribonucleoprotein K / P61978* / heterogeneous nuclear ribonucleoprotein K*ENSMUSG0000002154631
Nova1 / Q9JKN6 / RNA-binding protein Nova-1 / P51513* / NOVA alternative splicing regulator 1*ENSMUSG0000002104728
Nova2 / NOVA alternative splicing regulator 2 / Q9UNW9*ENSMUSG0000003041127


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:1990829 C-rich single-stranded DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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